Brassica rapa (field mustard): 103875325
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Entry
103875325 CDS
T03449
Name
(RefSeq) serine/arginine-rich splicing factor SR34A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103875325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
brp03041
]
103875325
Spliceosome [BR:
brp03041
]
Common components
Common spliceosomal components
SR proteins
103875325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_3
Nup35_RRM_2
RAP1
Motif
Other DBs
NCBI-GeneID:
103875325
NCBI-ProteinID:
XP_033137089
LinkDB
All DBs
Position
A01:complement(13554675..13557568)
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AA seq
290 aa
AA seq
DB search
MSDRSSRSIYVGNLPGDIRESEIEDLFYKYGRIVDIELKVPPRPPCYCFIEFEHPRDAKD
AVDGRDGYNFDGCRLRVELSHGGRGQSSGDRRGGYGGGGGYRGGGGGGGGGGGGSARFGV
SRHSEFRVIVRGLPSSASWQDLKDHMRKAGDVCFAEVTRDRDGAYGVVDYTNYDDMKYAI
RKLDDTEFKNPWARGYIRVKKYESSQSRSPSRSRSRSRSRGRDRSRSRSISRSKSPRKDM
SKSPRRSPARSISKSRSPSPDRKKSPLRSRSRSRSRSLSKSPAKVQQGSE
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcgatcttctcggtcaatctatgttggtaacttgcccggcgacattagggag
tctgagattgaagatctcttttacaagtatggccgcattgttgacattgaattgaaagtt
ccacctcgtcctccatgttattgctttattgagtttgagcaccctcgggacgccaaagac
gccgttgatggccgtgatggctataactttgacggctgccgcttgagggttgagctttct
catggtgggcgaggacagtcttcaggtgaccgtcgtggtggatatggtggtgggggtggc
tatcgtggaggtggtggtggtggtggtggcggcggtggtggatctgctcggtttggcgtc
tcacgacactctgaattccgagttatcgtacgtggccttccatcatctgcttcatggcaa
gatttgaaggatcatatgcggaaggctggtgatgtgtgcttcgctgaggtcactcgagac
cgtgatggagcttatggtgttgttgactacaccaactacgatgacatgaagtatgctata
aggaagcttgatgatacagagttcaaaaacccatgggctagaggctatataagggttaag
aaatatgaaagctcccagtcaagaagcccaagcagaagcagaagccgtagccgtagtcga
ggccgtgatcgcagccgtagccgcagcatcagcagaagcaagagcccaaggaaggatatg
agtaaatcaccaagacgatcccctgccagatcaatatcaaaatctagatcgccatctcct
gacaggaagaagagcccccttaggtccaggtccaggtccaggtccaggtctctctcaaaa
tctccagcaaaggttcaacaaggcagtgagtga
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