Brassica rapa (field mustard): 117127099
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Entry
117127099 CDS
T03449
Name
(RefSeq) protein PELOTA 1-like
KO
K06965
protein pelota
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117127099
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
117127099
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
117127099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
117127099
NCBI-ProteinID:
XP_033132276
LinkDB
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Position
A08:8614032..8617832
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AA seq
419 aa
AA seq
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MRILRRDFVRDGPGSAKLMAEDSDDLWFTYNLIAPGDSVMAVTSRKVLRERGNSKRVDSE
RVDSKREDSDSDQRVDSKKPVGSKKRGDSKNRLDAELDDSKPLVSERLTLKLEVQVEEVN
YDKDGGVLRILGTNILENEHVPLGAYHSLELVLKRRFLLRKKIWDSMAIDTLNQAKHHNS
SSDLAVVLMQEGHAQIFLVGKSVGAPIETSIPNRKHAGYEAALKKFFENVVRAFVKHVDF
NVVRCVVIASPGFTKDQFHRHLLLEAERRQLKPITENKSRILLVHANSGYRHSLGEVLSD
PKVMKMIQDTKASKEVNALRDFFTMFEKDPYRACYGPKQVEFAHEQKAIQTLLITDELFK
NSDVKERKKYVDFVESVKKLGGEAFIFSSMHVSGEQLEMHTGIAALLRFPLPGLDDVEM
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcctccgcagggattttgttcgtgatggaccaggaagcgctaaactgatggca
gaggactcggatgatctctggtttacttataacttgattgcccccggcgatagtgtaatg
gctgtcacatcgagaaaggttctgagagagagaggaaattctaaacgtgtagactctgaa
cgtgttgactctaaacgtgaagactctgactctgatcaacgtgttgactccaaaaaacct
gtaggctctaaaaaacgtggtgactctaaaaatcgtttagacgctgagcttgacgactct
aaacctctagtgtctgaacgtctgacactgaagctagaagtacaagttgaggaggtaaac
tatgacaaagacggtggtgttttgcgcatacttgggacgaatatccttgagaacgagcac
gtaccgcttggtgcataccatagtttggagctcgtgctgaaacgacgtttcctattgagg
aaaaaaatatgggactcaatggctattgatacactcaaccaggcaaaacatcataattcc
agttctgatttagctgtagttctaatgcaagaaggacatgcacaaatcttccttgtcggc
aaaagtgtgggtgcaccaatagaaacatcaattcctaatcgtaagcatgctggttacgag
gctgcgttgaagaaattctttgagaacgttgtgcgtgcctttgtgaaacacgttgacttc
aatgtcgttcggtgtgtagtgatcgcaagtcctggctttacaaaggatcagtttcatcgc
cacttgttgttggaagcagagagaagacagttgaaacctattactgagaacaaatcacgt
atacttctggtgcatgcaaactccggatataggcatagccttggagaggttctgagtgac
cccaaagtgatgaagatgatccaagatacaaaagcatcgaaagaggtgaacgctctcagg
gatttcttcaccatgttcgaaaaggatccatatcgggcatgctacggaccgaagcaagtg
gagtttgctcatgaacaaaaggcaatccaaacacttctcattacagatgagctgttcaaa
aattctgacgtgaaagaaaggaagaagtatgtggattttgtggagtcggtgaaaaaatta
ggaggagaggcttttatattttcttcgatgcatgtttcaggtgaacaactggaaatgcat
actggaattgcagctcttctcaggttccctttaccaggtctcgatgacgttgagatgtaa
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