KEGG   Brassica rapa (field mustard): 117128334
Entry
117128334         CDS       T03449                                 
Symbol
LOC117128334
Name
(RefSeq) SKP1-like protein 18
  KO
K03094  S-phase kinase-associated protein 1
Organism
brp  Brassica rapa (field mustard)
Pathway
brp03083  Polycomb repressive complex
brp04120  Ubiquitin mediated proteolysis
brp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:brp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    117128334 (LOC117128334)
   04120 Ubiquitin mediated proteolysis
    117128334 (LOC117128334)
  09126 Chromosome
   03083 Polycomb repressive complex
    117128334 (LOC117128334)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:brp04131]
    117128334 (LOC117128334)
   04121 Ubiquitin system [BR:brp04121]
    117128334 (LOC117128334)
   03036 Chromosome and associated proteins [BR:brp03036]
    117128334 (LOC117128334)
Membrane trafficking [BR:brp04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    117128334 (LOC117128334)
Ubiquitin system [BR:brp04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     117128334 (LOC117128334)
   Cul7 complex
     117128334 (LOC117128334)
Chromosome and associated proteins [BR:brp03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     117128334 (LOC117128334)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     117128334 (LOC117128334)
SSDB
Motif
Pfam: Skp1 Skp1_POZ
Other DBs
NCBI-GeneID: 117128334
NCBI-ProteinID: XP_033136464
LinkDB
Position
A09:15925909..15927457
AA seq 159 aa
MSESNKKFTLISSDEEPFEVSEAVAREFEIVAHMLEDGCSGSSIPIKTVNSNILGKVIEY
CKKHVEVGNIEGNSEEAKKELEEFDKNFIAVEMETLFSLILAANYLNVKGLLDIGCQKVA
DTIKDMEPEEVRSIFKIQNDYTPAEEEEVRKENIWAFER
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtctgagtcaaacaagaaatttacattgataagctccgatgaggagcctttcgaggtg
agtgaagcggttgcgcgtgagttcgagatcgtagcgcacatgctcgaagacggctgctct
ggtagcagtatcccgatcaaaaccgtcaacagtaatatcctcggcaaagtgatcgagtat
tgcaagaaacacgttgaagttggtaacatcgaaggaaactcggaggaggctaagaaggaa
ctcgaagagttcgacaaaaattttattgctgtggagatggagacgctcttttcactcatc
ctcgcagctaactatctcaacgtcaaaggccttctcgacattggttgccagaaggttgca
gataccatcaaagacatggaaccagaggaggttcgctctatttttaaaatccagaatgat
tacactcctgcagaagaggaagaagttcgcaaggagaacatttgggcttttgagcgctaa

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