Brassica rapa (field mustard): 117131528
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Entry
117131528 CDS
T03449
Name
(RefSeq) mRNA-capping enzyme-like
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117131528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brp03019
]
117131528
Enzymes [BR:
brp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
117131528
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
117131528
Messenger RNA biogenesis [BR:
brp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
117131528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
Tc-R-P
Y_phosphatase2
Y_phosphatase
DNA_ligase_A_M
PTP-SAK
PTP-NADK
Y_phosphatase3
CCTL2_WNK
StbA_N
Motif
Other DBs
NCBI-GeneID:
117131528
NCBI-ProteinID:
XP_033139514
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MDLNASPEPEEEEDPFLKRRLEPRAESAVEIARREREERTKRMRLDRPSRNSHHDHHQFH
HNNNSDTRVYDKSKIPQGWLDCPGFGLEIGCIIPSKVPLSESYNEHVPPGKRYSFKQVVR
NQRISGRKLGLVIDLTNTTRYYSTLDLKKDGIKHVKIACRGRDAVPDNVSVNSFVNEAIQ
FIVNQKHPKKYILVHCTHGHNRTGFMIVHYLMRSMPTMNVTQALKMFSDARPPGIYKPDY
IDALYTFYHEIKPETATCPPTPEWKRSTELDLNGDAVHQDDGDGDDDDDAQPGPVQEISQ
EIVTMSNDDILGDEIPYYQEEAYRKFCYKMLMMSIGGRGCAQFPGSHPVSLDRESLQLLR
QRYYYATWKADGTRYMMLLTIDGCYLIDRSFKFRRVQMRFPCRHSSGGIPDQVHHFTLLD
GEMVIDNPMNEKGQARRRYLVYDLVAINGESVVERTFCERWNMVVHEVIKGRDVDKQRNH
CYRYDLEPFGVRMKGFYLLSTVEKLLKGTIPSLSHEADGLIFQGWDDPYVPRTHKGLLKW
KYAEMNSVDFLFEMGEEDEGRRMLFLFERGKKKLMDGYTVEFRDGSDPSSYNGKIVECSW
DKEKKVWVSMRIRVDKTTPNDINTARKVIKSINDNITEEVLLQEIREIIRLPMYADRIRM
DLRAAGR
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggacctaaatgcttcaccggagcccgaggaagaggaggatccttttcttaagagacgc
cttgaaccccgagcagagtctgctgttgagatcgctagacgggagcgtgaagaaagaacc
aaaaggatgagacttgacaggccttcccgaaactctcaccatgatcaccaccagtttcac
cacaacaacaatagtgatactagagtctatgataaaagcaagatccctcaaggttggctg
gattgtcctggttttggtctggagataggatgcatcattccttctaaggttccccttagc
gaatcttacaacgaacatgttcctcctggcaaaagatactcttttaaacaagtcgtccgc
aaccagagaatcagtggacgaaaacttggtctagtgattgatctaactaatacaactcgt
tactattccacacttgacttaaagaaggatggcatcaagcatgttaagattgcttgcagg
ggtcgtgatgcggttccggataacgtctctgtaaactccttcgtcaacgaggctattcag
ttcatcgttaatcaaaaacacccaaagaagtatatcctcgtccactgtactcatgggcat
aatcggacagggttcatgatagttcattatcttatgcgctctatgcccaccatgaacgtt
acacaggcgttgaaaatgttttctgatgcccgcccacctgggatttataaaccggattat
attgatgctttatacactttttatcacgaaataaagcctgagactgctacttgcccacca
actcctgaatggaagaggtctaccgagcttgatcttaatggtgatgcagttcatcaagat
gacggtgatggtgatgatgatgatgatgctcagcctggccctgtccaagaaatcagtcag
gagattgtgacgatgtcaaatgatgacatattgggtgatgaaataccctattatcaagaa
gaagcttaccgaaaattctgttataagatgcttatgatgagtattgggggaagaggatgt
gcacaattcccagggtcacaccctgtatccttagacagggagagtttacaacttttgaga
cagcgctactattatgcgacatggaaagcagatggaacacgttatatgatgctcttaacc
atagatggttgctatctgatagataggagctttaagtttcgaagggtacagatgcgtttc
ccctgtaggcactcaagtggaggaatacctgatcaagtacatcatttcactttgcttgat
ggagaaatggttatagataatccgatgaatgaaaaagggcaggcgaggaggaggtacctc
gtatatgacttggtagcaatcaacggtgaatcagtcgtagagcggacattctgtgaaaga
tggaacatggtagtgcacgaggtgatcaaaggccgtgatgttgataagcaaaggaatcat
tgctacagatatgacctggagccttttggtgtacggatgaagggtttttatttgctctcg
acagttgagaagcttttgaagggtaccattccgtcactttcgcatgaagcagatggcctt
atatttcagggctgggacgatccttacgttccccgaacgcataaaggtctgctgaagtgg
aagtatgcggaaatgaactcggtagactttctgttcgagatgggcgaggaggatgaaggt
cgcaggatgctcttcttgtttgaaagagggaagaaaaagcttatggacggatatacggtt
gagttcagagatggttcggatccgtcaagctacaatgggaagattgtagagtgttcatgg
gataaggagaagaaagtatgggttagcatgcgtatcagagtcgacaaaactacaccaaac
gatatcaacaccgctcgtaaggtgattaaaagcataaacgacaacatcacagaggaagtg
ttgcttcaagagataagagagatcatccgtctcccaatgtacgctgaccgcattcgaatg
gaccttcgagcagctggacgttga
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