Brassica rapa (field mustard): 117132554
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Entry
117132554 CDS
T03449
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
brp
Brassica rapa (field mustard)
Pathway
brp03010
Ribosome
brp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
brp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
117132554
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117132554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
brp03011
]
117132554
04121 Ubiquitin system [BR:
brp04121
]
117132554
Ribosome [BR:
brp03011
]
Ribosomal proteins
Eukaryotes
Large subunit
117132554
Archaea
117132554
Ubiquitin system [BR:
brp04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
117132554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
zf-C4pol
TBK1_ULD
DUF2604
Ubiquitin_5
UBL_UBAC1
Plexin_RBD
Dsc3_N
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
117132554
NCBI-ProteinID:
XP_033143083
LinkDB
All DBs
Position
A03:8850194..8851353
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGIIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKIK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgtgaaaacgctaacgggcaagaccatcaccctcgaggtggagagcagc
gacaccatcgacaatgtcaaggccaagatccaggacaaagaaggaatccctccggatcag
cagaggttgatattcgccggaaaacagcttgaagatggtcgtaccttggctgactacaac
atccagaaagaatcgactctgcatcttgtcctgaggctaaggggaggtatcattgagccg
tctttgatggctttggctcgtaagtacaatcaagacaagatgatctgccgcaagtgttac
gctcgtctgcacccaagggctgtgaactgcaggaagaagaagtgtggccacagcaaccag
ttgaggcccaagaagaagatcaagtga
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