Bradyrhizobium amphicarpaeae: CIT40_04020
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Entry
CIT40_04020 CDS
T05700
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
brq
Bradyrhizobium amphicarpaeae
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
brq03009
]
CIT40_04020
Enzymes [BR:
brq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
CIT40_04020
Ribosome biogenesis [BR:
brq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CIT40_04020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S4
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AWL99265
UniProt:
A0A2U8PN86
LinkDB
All DBs
Position
1191748..1193844
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AA seq
698 aa
AA seq
DB search
MPRDSDKDNDSRGRRGPPKGGRSGKPRGPDKKFAKRGPEGRSDARPPRGNSDSRPFRRRE
EGDAPRRDFSDRPKFNRDDRPREDRGERSFKPRGDRPFSDRASRDGDKRPFKPRGDRPSY
GRDDRPPRRDRDESRPAGRSGGERKFGDKKPYAPRGDRPERKFDGERKFSRGAPREDRGE
RSFKPRGDRPNFDRGERSDSKPWQKRDAGPRGDRPPRKDFGKGPRKDFGGRDRGGDKPWQ
KRDDRQSGGDERPRFSRARDDRATGDRPFRERPKFDRPREDRPKFDRPRRDGDGDRGGRG
GDRPTFNRPRERSEGRSDWHEHPRNEGGFGDRPRRENEDESRIFEKRPAFGGRGAYRERD
RDSDRRPRRDEEPKPKKAGERIAKALARAGLASRRDAEEMVTQGRVTVNGRVINSPALDI
TKNDVVLVDGKPLPERERTRLFLYHKPRGLMTTHDDPEGRPTVFDNLPEGLPRLISVGRL
DFNTEGLLLLTNDGGLARTLELPDTGWLRRYRVRAHGDVTQAQLDALKDGVEIEGVKYGP
IDATLERDQGANVWLVFAIREGKNREVRNVCAHLGLEVNRLIRVSYGPFQLGEVPEGQVE
EIKSRVLRDQLGDKIIEKSGAQFDVPSKSARVDDAPSEKKPATKRGVINDRKGRRVLVQR
TGSEEARERNEEEAAGYGPPRRPKRGYHGKRDLTPKED
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgacagcgacaaagacaacgattcccgcggccggcgaggcccgcccaagggc
ggccgcagcggcaagccgcgcggcccggacaagaagttcgccaagcgcggccccgagggc
aggagcgacgcccgcccgccccgtggtaacagcgacagccgtcctttccgccgccgcgag
gagggcgatgccccgcgccgcgacttcagcgaccggccgaaattcaaccgcgacgaccgc
ccccgggaagatcgcggcgagcgcagcttcaagccgcgtggcgatcgtccgttctcggat
cgcgcctcgcgcgacggcgacaagcggcccttcaagccgcgcggtgatcgcccgtcctac
ggccgcgacgaccgtccgccgcgccgggatcgcgacgagtcccgccccgccggccgttcc
ggtggtgagaggaaattcggcgacaagaagccttacgcgccgcgcggcgatcgtccggag
cgcaagttcgacggcgagcggaagttttcgcggggtgcaccgcgcgaggaccgcggcgag
cgcagcttcaagccgcgcggagaccgcccgaatttcgatcgcggcgagcggagcgattcc
aagccgtggcagaagcgcgacgcgggtccgcggggcgatcgtccgccgcgcaaggatttc
ggcaagggtccgcgcaaggatttcggtggtcgcgaccgcggcggggacaagccctggcag
aagcgcgacgatcggcaaagcggcggcgatgagcgtccgcgcttctcgcgcgcgcgcgac
gatcgcgcgacgggcgatcgtccgttccgcgagcggccgaaattcgaccggccgcgcgag
gaccgtccgaaattcgaccggccccgccgcgacggcgatggcgaccgcggcgggcgtggc
ggcgaccggccgacattcaaccgtccgcgcgagcgctccgaggggcgctccgactggcac
gagcatccgcgcaacgaaggtggcttcggtgatcgcccgcgccgtgaaaacgaggacgag
agcaggatcttcgagaagcgccccgccttcggcggccgcggcgcctatcgcgagcgcgac
cgcgattccgatcgccggccgcgtcgtgacgaagagccgaagccgaagaaggccggcgag
cgcatcgccaaggcgctcgcgcgcgcagggcttgcctcgcgccgcgatgccgaggagatg
gtcacgcagggccgcgtcaccgtcaacggccgcgtcatcaactcgccggcgctcgacatc
accaagaacgacgtcgtcctggtcgacggcaaaccgttgccggaacgcgagcgcacgcgg
ctgttcctctatcacaagccccgcgggctgatgaccacgcatgacgaccccgagggccgt
ccgaccgtgttcgacaatctgcccgaaggcctgccgcggctgatcagtgtcggccggctc
gatttcaacaccgagggcctgctgctgctcaccaatgacggcggactggcgcgcacgctc
gaactgcccgacaccggctggctgcgccgctaccgcgttcgcgcccatggcgacgtcacc
caggcacagctcgacgcgctcaaggacggcgtcgagatcgagggcgtcaaatacggcccg
atcgacgcgacgctggagcgcgaccagggcgccaatgtctggctggtgttcgcgatccgc
gaaggcaagaaccgcgaggtgcgcaatgtctgcgcccatctcgggctcgaggtgaaccgg
ctgatccgcgtctcctacggtccgttccagctcggcgaagtccccgaaggccaggtcgag
gagatcaagtcccgcgtgctgcgcgaccagctcggcgacaagatcatcgagaagtcgggg
gcgcagttcgacgtgccgtcgaaatccgcgcgggtcgacgatgcgccaagcgaaaagaag
cccgccaccaagcgcggcgtgatcaacgatcgcaagggccgccgcgtgctggtgcagcgc
accggcagcgaggaggcgcgcgagcgcaacgaggaagaggccgccggctacggcccgccg
cgccgtcccaagcgcggctatcacggcaagcgcgacctgacgccgaaggaggactag
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