Bradyrhizobium amphicarpaeae: CIT40_04900
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Entry
CIT40_04900 CDS
T05700
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
brq
Bradyrhizobium amphicarpaeae
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
brq03000
]
CIT40_04900
Transcription factors [BR:
brq03000
]
Prokaryotic type
Helix-turn-helix
Other families
CIT40_04900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_lid_14
AAA_5
Mg_chelatase
HTH_28
HTH_23
HTH_17
HTH_29
PAS_7
HTH_30
HTH_7
MCM
AAA
AAA_7
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AWL99425
UniProt:
A0A2U8PNN3
LinkDB
All DBs
Position
1371358..1373223
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AA seq
621 aa
AA seq
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MASLSASNHVARVLSVANQLADVDASSRIASSWRRCLISHKLDPARQGPPQTLSEAEIRH
VAEPMEEMIRLVTPELDDLARVLRDAGYCVNLADANATMLFSRLPGEADARMFMDWKIYT
GSNFSEAFEGTNGLGTALAEQKPILVHRDEHFRAQWHMFSCAVVPLFDQAGRLTGAVNIT
SCREDLERAAHQLALAVTMEATRRMEGAIFRGHFRNAWIATVPGDGGSGLLAYDEDRRIV
GACRSARALLGLTDGLIASGIDLSRYVKFDHHAARSADETVELRRADGSGLGQGHVTPPL
RARSSVRPLAPRRDEPVDRFDALHRLAGRDPGLIRSVRRLRSIGDHNLPVLLYGETGVGK
DVFARAIHAGSSRARGNYVALNCAAMPESLIDAELFGYEAGAFTGARRDGSKGLIVQADG
GTLFLDEIGDMPIALQTRLLRVLENREVWPLGALKPAAVDIRLISATHRDLGRMAEEGAF
RADLYFRLRGLEVRLPALRERADRDDVIRQIAREEAPNCRVSDEAWSRLSAYSYPGNMRQ
LRHVLRLAGCTAEDGVITDADLDLPPFGGRAEPDLAAAERATIVEALRKHGGRVTEAARV
LKLGRATLYRKIKAMKIETAQ
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggccagcctgtcggcctcgaaccatgtcgcccgtgtcttgtccgtcgccaatcagttg
gccgacgtcgatgcctcgtcgcggatcgcgagttcctggcggcgttgcctcatcagccac
aagctcgatcccgcccggcaggggccgccgcagacgcttagcgaagccgagatccgtcac
gtcgccgagccgatggaggagatgatccggctcgtcacgcccgagctcgacgacctcgcc
cgcgtgctgcgcgatgccggctattgcgtcaacctggcggatgccaacgccaccatgctg
ttcagccgcctgcccggcgaggccgacgcgcggatgttcatggactggaagatctacacg
ggctcgaatttttccgaggctttcgaaggtaccaacgggctcggcaccgctcttgcggag
cagaagccgatcctggtgcatcgtgacgagcattttcgcgcgcagtggcacatgttctcc
tgcgccgtggtgccgctgttcgaccaggccggtcgcctcaccggcgccgtgaacatcact
tcttgccgggaagatctcgagcgcgctgcgcatcagctcgcgctcgcggtgacgatggag
gcgacacggcgcatggagggcgcgatcttccgcggtcatttccgcaacgcctggatcgca
accgtgccgggcgacggcggcagcggtctgctcgcctatgacgaggatcgccgcatcgtc
ggcgcctgccgttcggcgcgcgcattgctggggctcaccgacggcttgatcgcatccggc
atcgatctgtcgcgctacgtcaagttcgatcatcatgccgctcgcagcgcggacgagaca
gtcgagttgcgccgcgccgatggcagcgggttggggcaggggcatgttacgccgccgctg
cgggcgagatcatcggtgcgcccgcttgcaccgcgccgcgatgagccggtcgatcgcttc
gacgcattgcatcggctcgccggtcgcgatcccggcttgatcagaagcgtcaggcggctc
cgcagtatcggcgatcacaatctgccggtgctgctgtacggcgaaaccggcgtgggcaag
gacgtgttcgcgcgcgccattcacgccggcagtagccgggcgcgcggcaattacgtcgcg
ctgaactgcgcggcgatgccggagagcctgatcgacgccgaactgttcggctacgaggcc
ggcgccttcaccggtgcgcggcgcgacggctcgaaggggctgatcgtgcaggccgacggc
ggtacgctgttcctcgacgagatcggcgacatgccgatcgcgctgcagacgcggctgctc
cgcgtgctggaaaaccgcgaggtctggccgctcggcgcgctcaagcccgccgccgtcgac
atccgcctgatcagcgccacccaccgcgatctcggccgcatggcggaggagggcgccttc
cgcgccgatctctatttccgcctgcgcggcctggaggtgcggctgcccgccttgcgcgag
cgcgccgaccgggacgacgtcatccgccagatcgcgcgcgaggaggcgccgaactgccgc
gtctcggacgaagcatggtcgcggctctcggcctattcctatcccggtaacatgcgccag
cttcgccacgtgctgcggctcgccggctgcaccgcggaggatggggtgatcaccgatgcc
gatctcgatctgccgccgttcggcgggagggcagagcctgatctcgcagcggccgagcgt
gcgacgattgtggaagctttgcgcaagcatggtggccgcgtcacggaagcggcgcgggtc
ctgaagcttggtcgcgcaacgctgtatcggaagatcaaggcgatgaagatcgagacggcg
cagtag
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