Bradyrhizobium amphicarpaeae: CIT40_05925
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Entry
CIT40_05925 CDS
T05700
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq00362
Benzoate degradation
brq01100
Metabolic pathways
brq01120
Microbial metabolism in diverse environments
brq01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CIT40_05925 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
CIT40_05925 (pcaH)
Enzymes [BR:
brq01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
CIT40_05925 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AWL99612
UniProt:
A0A2U8PP72
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Position
1593876..1594664
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AA seq
262 aa
AA seq
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MNAQAPALRDPRLNRPEPLAPPLGDGGFFQRDRSIHPPAHAPGYKSSVLRSPRQSLLSLE
GSVSEITGPVFGHNDLGPLDNDLIRNYAKDGDPVGERIIVHGRVLDETGRGVPNTLVEFW
QANAGGRYRHKKDTYLAPIDPNFGGCGRALTDDTGYYYFRTVKPGPYPWRNYVNSWRPAH
IHFSVFGSGFAQRLITQMYFEGDPLIPICPILTTIPDKDALDRLVAPLDLNASAPFDSLA
YRFDIVLRGQRSTYFENRTAGN
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccaggcgccagccttgcgggatccccgcctcaaccgccccgagccccttgcg
ccgccgctcggcgacggcggcttctttcagcgggatcgttcgattcatccgccggcgcat
gcgccgggctacaaatcctcggtgctgcgctcgccgcgccagtctctgctgtcgctggag
ggttcggtctccgagatcacgggaccggtgttcggccacaacgatctcggcccgctcgac
aatgatctgatccgcaactacgccaaggacggcgatccggtcggcgagcgcatcatcgtg
cacggccgcgtgctggacgagaccggccgcggcgtgccgaacacgctggtcgagttttgg
caggccaatgccggcggccgctaccggcacaagaaggacacttatctggcgccgatcgac
ccgaatttcggcggctgcggtcgcgcgctgaccgacgacaccggctactactatttccgt
accgtgaagccgggaccctatccctggcgcaactacgtcaacagctggcgtccggcccat
atccacttctcggtgttcggctcaggctttgcacagcggctgatcacgcagatgtatttc
gagggcgatcccctgatcccgatctgtccgatcctgacgaccatcccggacaaggatgcg
ctcgaccgcctcgtcgcgccgctcgacctcaacgcctcggcgccgttcgattcgctggcc
taccgcttcgacatcgtcctgcgcggtcagcgctccacctatttcgaaaaccgcaccgcg
gggaactga
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