Bradyrhizobium amphicarpaeae: CIT40_06620
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Entry
CIT40_06620 CDS
T05700
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq00071
Fatty acid degradation
brq00280
Valine, leucine and isoleucine degradation
brq00310
Lysine degradation
brq00362
Benzoate degradation
brq00380
Tryptophan metabolism
brq00410
beta-Alanine metabolism
brq00640
Propanoate metabolism
brq00650
Butanoate metabolism
brq00907
Pinene, camphor and geraniol degradation
brq00930
Caprolactam degradation
brq01100
Metabolic pathways
brq01110
Biosynthesis of secondary metabolites
brq01120
Microbial metabolism in diverse environments
brq01200
Carbon metabolism
brq01212
Fatty acid metabolism
Module
brq_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CIT40_06620
00650 Butanoate metabolism
CIT40_06620
09103 Lipid metabolism
00071 Fatty acid degradation
CIT40_06620
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CIT40_06620
00310 Lysine degradation
CIT40_06620
00380 Tryptophan metabolism
CIT40_06620
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CIT40_06620
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CIT40_06620
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CIT40_06620
00930 Caprolactam degradation
CIT40_06620
Enzymes [BR:
brq01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CIT40_06620
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CIT40_06620
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CIT40_06620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
Pyr_redox_2
ApbA
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AWL99733
UniProt:
A0A2U8PPS1
LinkDB
All DBs
Position
1771887..1774001
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AA seq
704 aa
AA seq
DB search
MDSKIMTALGDRVLELGPKPATDSPYRHFKLTRDEDGVAWLLFDRADASANTLSSDVMEE
FDAVLAVIETERPAGLVIRSAKPSGFIAGADVNEFRGASDPGIAGDPGMVEMRIRAAHAV
VDHLEALKLPTVAVIHGFCLGGGLEVALACQSRIAIDGARFGFPEVMLGLHPGLGGTARF
TALVNPTQSMALMLTGRTIDARRAKALGLVDTVTQERHVRGAVKDALFGRLKRAKPGLLT
RAANFGFVRGLLAKRMRSEAAKAAPREHYPAPYALIDLWEAHGGNKAAMLKAEQASFARL
MVTPTAQNLIRVFFLREQMKKAAGSGNTIKHVHVIGAGAMGGDIAAWVAGQGLRVSLADM
KAEPIAGAVKRAAELYGKIIRKPTEVRDALDRLIPDMDGEGVRNADLIIEAVPEKLELKQ
KVYAGLEPRMKPAAILATNTSSIPLQDLRTALARPERLVGLHFFNPVSRLQLVEVVSHDG
NDPQVLREALAFVGAIDRLPLSVKSSPGFLVNRALTPYMLEAMVMLDEKTDQRLIDAAAE
QFGMPMGPIELADQVGLDICLDVGDMLRTKFGDLLPPTPAWLREKVAKGELGRKTGKGFY
TWKDGKAEKAPLPDTGPRVTDQMIDRLMLPMSNVCVACLREGIVDDPDAVDGAMIFGTGY
APFRGGPLNYARTRGVENVVSTLRGLAERFGGRFAPDAGWDSLQ
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaagatcatgaccgcgctgggcgaccgcgtgctggagctcggacccaagccg
gcgacggacagtccctacaggcacttcaagctgacgcgcgatgaggacggcgtggcctgg
ctgctgttcgaccgcgcggacgccagcgccaacacgctgtcctcggacgtgatggaggag
ttcgatgccgtgctcgcggtgatcgagaccgagcgtcccgccggcctcgtgatccgctcc
gccaaaccgtccggcttcatcgccggcgccgacgtcaacgaattccgtggtgccagcgat
cccgggatcgccggcgatcccgggatggtcgagatgcgcatccgcgccgcgcatgcggtg
gtggatcatctcgaagccttgaagctgccgacggtcgccgtgatccacggcttctgcctc
ggcggcggcctcgaggttgcgctcgcctgccagtcgcgcatcgcgatcgatggggcgcgc
ttcggcttcccggaggtgatgctgggtctgcatcccggcctcggcggcaccgcgcgtttc
accgcgctggtcaatcccacccagtcgatggcgttgatgctgaccggccgcaccatcgat
gcgcgccgcgccaaggcgctcggtctcgtcgataccgtgacgcaggagcgtcatgtccgg
ggcgcggtgaaggacgcactgttcggccggctgaagcgggccaagcccggtcttctcacg
cgtgcggcgaatttcggctttgtgcgcggtctcctggccaagcgcatgcggtcggaggcg
gcgaaggcggcgccccgcgaacactatcccgcgccttacgcgctgatcgacctctgggag
gcccatggcggcaacaaggccgcgatgctgaaggccgagcaggcctcgttcgccaggctg
atggtgacgccgaccgcccagaacctgatccgggtcttcttcctgcgcgagcagatgaag
aaggcggcaggcagcggtaacaccatcaagcacgtccatgtcatcggcgccggcgccatg
ggcggcgacatcgcggcttgggtcgccgggcaggggctgcgcgtctcgctcgccgacatg
aaggccgagccgatcgcgggcgccgtcaagcgcgccgccgaactctacggcaagatcatc
cgcaagccgacagaggtgcgcgacgcgcttgatcggctgatcccggacatggacggagag
ggcgtccgcaatgccgatctcatcatcgaggcagtccctgagaagctcgagctgaagcag
aaggtctacgccgggctcgagccgcggatgaagccggccgcgattctcgctaccaacacg
tcgagcattccgcttcaggatctgcgcaccgcgctggcgcggcccgagcggctggtcggc
ctgcatttcttcaatccggtgtcgcggctgcaattggtcgaggtcgtcagtcacgacggc
aacgacccacaggtgctgagggaggcgctggctttcgtcggcgcgatcgatcgtctgccg
ctctccgtgaagagctcgccgggcttcctcgtcaaccgggcgctgacgccgtacatgctc
gaagccatggtgatgctggacgagaagaccgaccagcgcctgatcgacgccgcggccgag
cagttcggcatgccgatggggccgatcgaactcgctgaccaggtcgggctcgacatctgc
ctcgacgtcggcgacatgctgcgcaccaagttcggtgacctcctgccgcccacccccgca
tggttgcgcgaaaaagtcgccaagggcgagcttggccgcaagaccggcaagggcttctat
acctggaaggacggcaaggccgagaaggcgccactccccgacaccggtccgcgcgtcacc
gaccagatgatcgaccgcctgatgctgccgatgtccaatgtctgcgtcgcctgcctacgc
gagggcatcgtcgacgatcccgatgcggtcgacggcgccatgatcttcggtaccggctat
gcaccgttccgcggcggaccgctgaactatgcgcgcacgcgcggcgtggagaatgtcgtg
tccacgttgcgcgggctcgccgagcgattcggcggacgtttcgcgccggatgcgggctgg
gacagtttgcaatag
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