Bradyrhizobium amphicarpaeae: CIT40_07540
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Entry
CIT40_07540 CDS
T05700
Name
(GenBank) HAMP domain-containing protein
Organism
brq
Bradyrhizobium amphicarpaeae
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
WXG100_2
OKR_DC_1_N
FBF1
HmpF
OmpH
RNase_Y_N
YscO-like
ATG14
AF_0408_N
YjdP
CEP89
FUT8_N_cat
PII1_coiled_coil
Motif
Other DBs
NCBI-ProteinID:
AWL99901
UniProt:
A0A2U8PQ95
LinkDB
All DBs
Position
complement(1964846..1971142)
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AA seq
2098 aa
AA seq
DB search
MSDLDPGSASRSGRRVPKPKPNGVSDADSRAELLLALQAMRSGDFSVRMSGDYLGIDGKI
ADTFNEIIAANQRMAQQLELVGQVVGREGKTRQRVKFGLASGSWADMEGSVNTLIDDLLW
PTREVTRAVAAVAQGDLLQTVKLDVDGRPLRGEFLQSANIVNTMIKQLGVFTSEVTRVAR
EVGTEGKLGGQAQVPEVTGVWKDLTESVNSMANNLTNQVRNIAEVTIAVANGDLSKKITV
DVRGEILQLKEAINTMVDQLRSFASEVTRVAREVGTDGKLGGQAIVPGVAGTWKDLTDSV
NAMCGNLTAQVRNIANVTTAVARGDLSRKITVDVRGEILELKDTINTMVDQLNAFASEVT
RVAREVGTEGKLGGQAQVPGVAGTWKDLTDNVNFMASNLTAQVRNIADVATAIASGDLSK
KITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGTEGRLGGQANVLGVAGTWKDL
TESVNSMASNLTAQVRNIAEVTTAVAGGDLSKKITVDVRGEILELKDTINTMVDQLNAFA
GEVTRVAREVGTEGKLGGQAVVRGVGGTWKDLTDSVNSMASNLTGQVRNIAEVATAVAKG
DLSKKITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGTDGKLGGQAGVPGVAGT
WKDLTDSVNSMAGNLTAQVRNIAEVATAIAGGDLSRKITVDVRGEILQLKDTLNTMVDQL
NRFAGEVTRVAREVGTEGRLGGQANVPGVAGTWKDLTDSVNSMAGNLTAQVRNIAEVTTA
VARGDLSRKITVDVKGEILELKNTINTMVDQLNGFAGEVTRVAREVGTEGKLGGQAEVPG
VAGTWKDLTDNVNFMASNLTAQVRNIAEVATAIAGGDLSKKITVDVRGEILLLKDTLNTM
VEQLRSFAAEVTRVAREVGTEGRLGGQAVVPGVGGTWKDLTDNVNLLAANLTTQVRNIAE
VTTAVARGDLSRKITVDVKGEILELKNTINTMVDQLNAFAGEVTRVAREVGTEGKLGGQA
QVPGVAGTWKDLTDTVNLMAANLTEQVRGIVKVVTAVANGDLKQNLTMKSRGEVAALADT
INNMTETLATFADQVTSVAREVGVEGRLGGQANVPGAAGTWKDLTGNVNLLAANLTSQVR
AIAEVATAVTKGDLTRSIQVDARGEVAELKDNINTMITNLRLTTDVNTEQDWLKTNLAKF
TNMLQGQRDLTTVGRLLLTELSPLVNAHTGVIYQVESEDNPELVLLASYASDGIYPYQRV
LQFGDGLIGQCALDKRPRMVADIPSDVVPINSALFRVAPKNLVVLPVLFENQVKAVIELA
SLVSFTTSQMTFLEQLTDSIGIVLNSIEATMQTEGLLKQSQQLAGELQTQQRELQQTNDQ
LEQKAQQLAERNVEVERKNQEIEQARRALEEKATELALTSKYKSEFLANMSHELRTPLNS
ILILGQQLTDNPDGNLSAKQVEFARTIHGAGTDLLNLISDILDLSKIESGTVTVDAEEIL
TANLLETVGRPFRHEADNRNLSFKIDIDPNLPRSVVTDSKRLQQVLKNLLSNAFKFTAEG
EVRLKVTGAVGGWGTDHPVLNSAPAVIAFEVSDTGIGIPLEKQKLIFEAFQQADAGTSRK
YGGTGLGLAISRELASLLGGEIHLRSLPGKGSSFTLYLPLKYSGPTLAPRTTPTLQPHNQ
PPALQPAAPEQQRVIEQLADDRLNLEPGDSILLIVEDDPHYARVLVDLARDKGFKVLVAA
RGAEALELAKQYQPRAVSLDVFLPDMLGWTVLSQLKHNPLTRHIPVQIITLDEDRQHALA
RGAFSFVNKPTTTEGVSAALTQIKEYARPRRKRLLIVEDNEAEQLSIRELLHHDDIEIVT
TDTGAGALSTLREAPCDCVVLDLRLPDMSGFEVLDQIRNDEALSNIPVVVFTGRELSADE
DAELHTMARSIVVKGVESPERLLDETALFLHRVITELPLEKQRMLEKLNSSDEDLIGKTA
LLVDDDARNIFALSSVLERRGMKVLTATTGREAVTLVESNPEIAIVLMDIMMPQMDGYQT
IGVIRENPAFARLPIIALTAKAMKGDREKCLEAGASDYLAKPVNTDQLLLAIRMWLHR
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacctcgatcccggatctgcatcacggtccggtcgtcgcgtcccaaagccaaaa
cccaacggtgtatctgatgcggattcgcgggcggaactgctgctcgccctgcaggccatg
cgcagcggcgatttctccgtccgcatgagcggcgactatctcggcatcgacggcaagatc
gccgacactttcaatgaaatcatcgccgccaaccagcgcatggcgcagcaactcgagctt
gtcggccaggtggtcggccgcgaaggcaagacgcgccagcgcgtgaagttcggccttgcc
tccggctcctgggccgacatggaaggttcggtcaacacgctgatcgacgatttgctttgg
ccgacccgcgaggtgacgcgcgcggtcgccgccgttgcgcaaggcgacctgctccagacc
gtcaagctcgatgtcgacggccgtccgctgcggggcgagttcctgcagtcggccaacatc
gtcaacaccatgatcaagcagctcggcgtgttcacctccgaggtgacgcgcgtggcgcgc
gaggtcggcaccgagggcaagctcggcggccaggcccaggtgccggaagtgaccggcgtc
tggaaggacctcaccgagagcgtcaactcgatggcgaacaatttgaccaaccaggttcgc
aacatcgccgaggtgacgatcgcggtcgcaaacggcgatttgtccaagaagatcaccgtc
gacgtccgtggcgaaatccttcaactcaaagaagccatcaacacgatggtggaccagttg
cgctcgttcgcctccgaggtgacgcgcgtggcgcgcgaggtcggcaccgacggcaagctc
ggcggccaggccatcgtgcccggcgtcgccggcacctggaaggacctgaccgactccgtc
aacgcgatgtgcggcaatttgaccgcgcaggtccgcaacatcgccaacgtcaccaccgcc
gtggcgcgcggcgacctctcgcgcaagatcacggtggacgtgcgcggcgagatcctcgag
ctgaaagataccatcaacaccatggtggaccagctcaacgccttcgcctcggaagtgacg
cgcgtggcgcgcgaggtcggcaccgaaggcaagctcggcggtcaggcccaggtgcccggc
gtggccggcacctggaaggacctcaccgacaacgtcaacttcatggcctcgaacctgacc
gcgcaggtccgcaacatcgccgacgtcgccacggccatcgcgagcggcgacctttctaag
aagatcaccgtgaacgtctcgggcgaaatccttcagctgaaggaaacgctcaacaccatg
gtcgaccagctcaacgcgtttgccggcgaagtgacgcgcgtggcgcgcgaggtcggcacc
gagggacggctcggcggccaggccaacgtgctcggcgtcgccggcacctggaaggacctc
accgagagcgtcaactcgatggcgtcgaacctgacggcgcaagtccgcaacatcgccgag
gtgacgaccgcggtcgccggcggcgatctgtcgaagaagatcacggtggacgtgcgcggc
gagatcctggagctgaaggacaccatcaacaccatggtggaccagctcaacgccttcgcc
ggcgaagtcacccgcgtggcgcgcgaggtcggcaccgaaggcaagctcggcggtcaggcc
gtcgtgcgcggcgtcggcggcacctggaaggacctgaccgacagcgtcaactcgatggcc
tcgaacctcaccggccaggtccgcaacatcgccgaggtcgcgactgcggtcgccaagggc
gatctgtcgaagaagatcacggtgaacgtgtcgggcgagatccttcagctgaaggagacg
ctcaacaccatggtcgaccagctcaacgccttcgccggcgaagtcacgcgcgtcgcgcgc
gaggtgggcaccgacggcaagctcggcggccaggccggcgtccccggcgtcgccggcacc
tggaaggacctcaccgacagcgtcaactcgatggcgggcaacctcaccgcccaggtccgc
aacatcgcagaggtcgcgaccgcgatcgcgggcggcgatctgtcgcgcaagatcaccgtg
gacgtacgcggcgagatcctgcagctcaaggacaccttgaacacgatggtcgaccagctc
aaccgcttcgcgggcgaggtgacgcgcgtggcgcgcgaggtcggcaccgaaggtcgcctc
ggcggccaggccaatgtgccaggcgtcgccggcacctggaaggacctgaccgacagcgtc
aactcgatggcgggcaacctcactgcccaggttcgcaacatcgccgaagtgaccaccgcc
gtggcgcgtggcgacctgtcgcgcaagatcaccgtggacgtgaagggcgagatcctcgag
ctcaagaacaccatcaacaccatggtggaccagctcaacggctttgccggcgaagtgacg
cgcgtggcgcgcgaggtcggcaccgaaggcaagctcggcggccaggccgaggtgcccggc
gtcgccggcacctggaaggacctcaccgacaacgtcaacttcatggcctcgaacctgacg
gcccaggtccgcaacatcgccgaggtcgcgaccgcgatcgccggcggcgatttgtcgaag
aagatcacggtggacgtgcgcggcgagatcctgctgctcaaggacaccttgaacaccatg
gtcgagcagctccgctctttcgccgccgaagtgacgcgcgtcgcgcgcgaggtcggcacc
gaaggccgcctcggcggtcaggccgtcgtgcccggcgtcggcggcacgtggaaggatctg
accgacaacgtcaatcttctggccgcgaacctcaccacccaggtccgcaacatcgccgaa
gtcacgaccgcggtcgcgcgcggcgacttgtcgcgcaagatcaccgtggacgtgaagggc
gaaatcctcgagctgaagaacaccatcaacaccatggtggaccagctcaacgccttcgcc
ggcgaagtcacgcgcgtggcgcgcgaggtcggcactgagggcaagctcggcggccaggcc
caggtgcccggcgtcgccggcacctggaaggatctcaccgacacggtgaacctgatggcg
gcgaacctgaccgagcaggtccgcggcatcgtcaaggtcgtgaccgcggtcgccaacggc
gatctcaagcagaacctgacgatgaaatcccgcggcgaggtcgccgccctcgccgacacc
atcaacaacatgaccgagacgctcgcgaccttcgccgaccaggtgacgtcggtggcgcgc
gaggtcggcgtcgaaggccgcctcggcggtcaggccaacgtgccgggtgctgccggcact
tggaaggacctcaccggcaacgtcaacctgctcgcggccaacctcacctcgcaggtgcgc
gcgatcgcggaagtcgcgaccgccgtcaccaagggcgatttgacgcgatcgatccaggtc
gatgcccgcggcgaagtcgccgagctgaaagacaacatcaacacgatgatcacgaatctc
cgtctcacgacggacgtgaacaccgagcaggactggctgaagaccaacctcgccaaattc
accaacatgctgcagggccagcgcgacctgaccaccgtcggccggctgttgctcaccgaa
ttgtcgccgctggtgaacgcccataccggcgtgatctaccaggtcgagagcgaggacaat
ccggaactcgttctactcgcttcctacgccagcgacggcatctatccctatcagcgcgtc
ctgcaattcggcgatggcctgatcggccagtgcgccctcgacaagcggccgcgcatggtc
gccgacatcccctccgacgtggtgccgatcaactccgcgctgttccgcgtcgcgccgaag
aacctcgtcgtgctcccggtgctgttcgaaaaccaggtcaaggccgtgatcgagctcgcc
tcgctcgtctccttcaccacctcgcagatgaccttcctggagcagctcaccgactccatc
ggcatcgtgctcaattcgatcgaagcgacgatgcagaccgaaggcctgctcaagcagtcg
cagcagctcgccggcgagcttcagacccagcagcgcgagctgcagcagaccaacgaccag
ctcgagcagaaggcccagcagctcgccgagcgcaacgtcgaggtcgagcgcaagaaccag
gagatcgagcaggcccgccgcgccctggaggaaaaggccaccgagcttgccctgacctcg
aaatacaagtccgaattcctggccaatatgagccacgagctgcgcacaccgctgaactcg
atcctgatccttggacagcagctcaccgacaatccggatggcaacctctcggccaagcag
gtcgaattcgcccgcaccatccacggcgccggcaccgacctgctcaatctcatcagcgac
atcctggatctgtccaagatcgagtcgggaacggtcactgtcgacgccgaggagatcctg
acggcgaacctgctcgagaccgtcggccggccgttccggcacgaggcggacaaccgcaat
ctgtcgttcaagatcgacatcgatccgaacctgccgcgcagcgtcgtcaccgattcgaag
cggctgcagcaggttctgaagaacctgctctccaacgccttcaagttcaccgccgaaggc
gaggtgcgcctgaaggtcaccggcgcggtcggcggctgggggacggatcacccggtgctg
aactccgccccggccgtgatcgcgttcgaagtgtccgacaccggcatcggcattccgctg
gagaagcagaagctgatcttcgaggcgttccagcaggccgacgccggcaccagccggaaa
tacggcggcaccggccttggacttgcgatcagccgcgaactggcgagcctgctgggcggc
gagatccatctgcgcagcctgccgggcaagggctcgtcgttcacgctctatctgccgctc
aaatattccggcccgacgctcgcgccgcgtacgacgccgacgctgcagccgcacaaccag
ccgccggcgctgcagccggccgcgccggagcagcagcgcgtcatcgagcagcttgccgac
gaccgcctcaatctcgaacccggcgacagcatcctcctgatcgtcgaggacgacccgcat
tacgcgcgcgtgctggtcgacctcgcgcgcgacaagggattcaaggtgctggtcgctgcc
cgcggtgccgaggcgctggagctcgccaagcagtaccagccgcgcgcggtctcgctcgac
gtgttcctgcccgacatgctcggctggaccgtgttgagccagctcaagcacaatccgttg
acccgccatatccccgtgcagatcatcacgctcgacgaagatcgccagcatgcgctcgcg
cgcggcgcgttctccttcgtcaacaaaccgacgacgaccgagggcgtctcggccgcgctg
acgcagatcaaggaatatgcacgccccaggcgcaagcggctcctgatcgtcgaggacaac
gaggccgagcagctctcgatccgcgagttgctgcatcacgacgacatcgagatcgtgacg
accgacaccggcgccggtgcgctttcgacgctgcgcgaggccccctgcgactgcgtggtg
ctcgacctcaggctacccgacatgagcggcttcgaggtgctggaccagattcgcaacgac
gaggccctgtcgaacatcccggtcgtggtcttcaccggccgcgagctctccgcggacgag
gatgcggaacttcacaccatggcgcgcagcatcgtggtcaagggcgtggaatcgccggaa
cgcctgctcgacgagaccgcattgttcctgcaccgcgtgatcacggaacttccgctcgag
aagcagcgcatgctggagaagctgaacagttccgacgaggacctgatcggcaagaccgcc
ctgctcgtcgacgacgatgcccgcaacatcttcgcgctgtcgagcgtgctggaacggcgc
ggcatgaaggtgctgacggccacgaccggccgtgaagccgtcaccctggtcgaatccaat
ccggagatcgccatcgtgctgatggacatcatgatgccgcagatggatggctaccagacc
atcggcgtcattcgcgaaaacccggccttcgcccgccttccgatcatcgcgctgaccgcc
aaggcgatgaagggcgaccgcgaaaaatgcctggaggccggcgcgtccgactacctcgcc
aaacccgtcaacaccgatcaattgctgcttgcgatccgcatgtggctgcaccgttga
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