Bradyrhizobium amphicarpaeae: CIT40_09430
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Entry
CIT40_09430 CDS
T05700
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
brq
Bradyrhizobium amphicarpaeae
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brq03400
]
CIT40_09430
Enzymes [BR:
brq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
CIT40_09430
DNA repair and recombination proteins [BR:
brq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
CIT40_09430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AWM04588
UniProt:
A0A2U8Q5A6
LinkDB
All DBs
Position
complement(2425116..2426651)
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AA seq
511 aa
AA seq
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MERSHTPKTVRHLVLVLGDQLDADSAAFDDFDPASDVVLQMEVMEETSYIAQHKKRIAYF
LASMRHFRDELIARGRRVHYVEIDDPANTGRFETEIGRAQRRFKPSRTIALEPGDWRVAE
KLRRLPEPPEIRPDRHFLCSREEFANFCEKHPRPILETFYRAMRRKTGLLMDRENQPVGG
AWNFDAENRKALGRNSPAIPTRPSCPPDEITADVLRLVAKRFADSPGKIEGFDLPVTRGE
ALAQLDAFVTERLPLFGTYQDAMRSGEPFLFHSVLSGPLNLHRLQPREVVEAALRNKGAP
LNALEGFTRQIIGWREFVRGIYWQRMPHYADENALDADLPMPRFYWSGNTDMRCLAEAIG
HTIDHAYAHHIERLMVLGLFAMLLGVRPYEVHRWHMSMFWDAVDWVSLPNTLGMSQHGDG
GIVGTKPYAASGNYINRMSDHCRHCRFDPRQSVGEDACPFTTLYWNFLDKHRRRFASNVR
MRNQYSNLDRKDGAELRAIRRQAAAISQRVT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtggaaagatcccacacgcccaagaccgtcagacacctcgtgctcgtcctcggtgatcag
ctcgatgccgacagtgccgcattcgatgatttcgacccggccagcgacgtcgtactgcag
atggaggtgatggaggaaacgtcctacatcgcccagcacaagaagcgtatcgcctatttc
cttgcctcgatgcgacatttcagggacgagctgatcgcgcgcgggcgccgcgtgcattat
gtcgagatcgacgatcccgccaataccggacgcttcgaaacagagattggccgagcccag
cgtcggttcaagccgtcgcgaaccatcgcgctggagccgggggactggcgcgtggccgag
aagctgcgccgcctgcccgagccgcccgagatacgccccgaccgtcatttcctgtgctcg
cgggaggagtttgccaatttctgcgagaagcacccgcgcccgatcctggaaacgttctac
cgcgccatgcgccgcaagacgggcctgctgatggaccgcgagaaccagcccgtcggcggc
gcctggaacttcgacgcggagaaccgcaaggcgttgggcaggaacagcccggcgatcccg
acccgtccgtcgtgtccaccggatgagatcacggcggacgtcctgcgactggtcgccaag
cgtttcgccgacagtcccggcaagatcgaaggcttcgacctgccggtcacgcgcggcgaa
gcgctggcacaactcgacgccttcgtgaccgagcggcttccgcttttcggcacctatcag
gacgcgatgcggtccggcgagcctttcttgtttcattccgtcctgtccggaccgttgaac
ctgcatcgactacagccgcgcgaggtcgtcgaggctgcactacgcaacaagggcgccccg
ttgaacgcgctggaggggtttacgcgccagatcatcgggtggcgggaattcgtgcgcggc
atctattggcagcgcatgcctcactatgcagacgagaacgcgctcgatgccgatctgccg
atgcccaggttctactggagcggcaacaccgacatgcgctgcctggccgaagcgatcggc
cacaccatcgaccacgcctatgcgcatcatatcgaacggctgatggtgctcggactattc
gccatgctgctgggcgtgagaccttacgaggtgcatcgctggcacatgtcgatgttctgg
gacgccgtcgactgggtctcgctgccgaacacgctcggcatgagccagcatggcgacggc
gggattgtcggcaccaagccctatgcggcctccggcaactacatcaaccgcatgagcgat
cattgccggcattgccgtttcgatcccaggcaatccgtcggcgaggacgcctgccccttc
acgacgctgtactggaatttcctggacaagcaccgtcgccgcttcgcgtccaacgtccgg
atgagaaatcaatacagcaatctcgaccgtaaggacggcgcagagctgcgtgcgatccgg
cgccaggcggccgcgatcagccaacgcgtgacgtga
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