Bradyrhizobium amphicarpaeae: CIT40_13315
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Entry
CIT40_13315 CDS
T05700
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq00190
Oxidative phosphorylation
brq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CIT40_13315
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIT40_13315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brq03019
]
CIT40_13315
Enzymes [BR:
brq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
CIT40_13315
Messenger RNA biogenesis [BR:
brq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CIT40_13315
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
WWE87788
LinkDB
All DBs
Position
complement(3275051..3277243)
Genome browser
AA seq
730 aa
AA seq
DB search
MDSAQAVETKEKVQEPESLPAIASSPERFINRELSWLHFNRRVLEESVNPSHPMLERVRF
LSISANNLDEFFMVRVAGIKAQVREGIAERSPDGLTPSEQLALINRTVSELASDQQAIWR
DLRGTLADVGIVLVDGKDVTKAERTWIEDYFLNNVFPLLTPLAIDPAHPFPFIPSLGFTI
ALQLTRAADGKQMNALIRMPGKIDRFIRLPTEGKVVRLISLEQATALFINRLFPGYNLHG
QGAFRVIRDSELEIEEEAEDLVRLFETALKRRRRGSVIRLEIDAKMPEQLRSFVQHALST
ADDEVFLVDGVLAMNELSQLTRLDRPDLEFTPYVPRHPERVREQGGDIFAAIRQKDLVVH
HPYESFDVVVQFLQQATRDPDVVAIKQTLYRTSSNSPIVRALVEAAEAGKSVTALIELKA
RFDEEANIRWARDLERAGVQVVYGFLELKTHAKLSMVVRREGGSLTTYVHTGTGNYHPVT
ARIYTDLSYFTSDPTIGRDAARVFNFITGYAAPSDLEKMAVSPLTLRKRIIEHIQGETAH
AKHGRPGAVWMKMNALVDPDIIDALYEASQAGVQVELVVRGICCLRPGIPGLSENIRVKS
IIGRFLEHGRIYCFGMGQGLPSAKAAVYISSADMMPRNLDRRVEVLCPLQNPTVHQQVLE
QIMVANLKDNEQSWQLLPDGSSTRMKTAKGEEPFNVHNYFMTNPSLSGRGKSLKESSPRR
LTRRNERHQS
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggactctgcacaagctgttgaaactaaagaaaaagtccaggagcccgagagcctgccg
gcgatcgcgtcgagtcccgaacgatttatcaaccgcgagctctcctggctgcatttcaac
cgccgcgtcctggaggaatcggtcaatcccagccaccccatgctggagcgggtgcgattc
ctgtcgatttcggcgaataaccttgacgagttcttcatggtccgcgttgccggcatcaag
gcccaggtgcgcgagggcattgccgaacgtagccccgacggcctgaccccgtccgagcag
ctcgcgctgatcaatcgcaccgtctccgagcttgcctccgaccagcaggcgatctggcgc
gacctgcgcggcacgctggccgacgtcggcatcgtgctggtcgacggcaaggacgtcacc
aaggcggaacggacctggatcgaggactatttcctcaacaacgtgttcccgctgctgacg
ccgcttgcgatcgaccccgcccaccccttcccgttcattccaagcctcggcttcaccatc
gcgctccagctcacgcgcgccgccgacggcaagcagatgaacgcgctgatccgcatgccc
ggcaagatcgaccgcttcatccgcctgccgaccgagggcaaggtggtccggctgatctcg
ctggaacaggcgaccgccctgttcatcaaccgcctgttccccggctacaatctgcacggc
cagggcgccttccgcgtcatccgcgattccgagctcgaaatcgaggaagaggccgaggat
ctcgtccgcctgttcgagactgcgctgaagcgccgccgccgcggctcggtgatccggctc
gagatcgacgccaagatgccggagcagctgcgcagcttcgtccagcacgcgctgtcgacc
gccgacgacgaggtgttcctggtcgacggcgtgctcgccatgaacgagctctcgcaactc
acccgcctcgaccggcccgatctggaattcaccccttacgtgccccggcatcccgagcgg
gtgcgcgagcaaggcggcgacatcttcgctgcgatccggcagaaggacctcgtcgtccat
catccctacgaatccttcgacgtcgtcgtgcagtttctgcagcaggcgacgcgcgacccc
gacgtggtcgccatcaagcagacgctctaccgcacctcgagcaactcgccgatcgtgcgc
gcgctcgtggaagctgccgaagccggcaaatccgtcaccgcgctgatcgagctgaaagcg
cgcttcgacgaggaagccaacatccgctgggcgcgcgacctcgaacgcgccggcgtacag
gtcgtctacggcttcctcgaactgaaaacgcacgcaaaactctcgatggtggtgcgccgc
gagggcggcagcctcaccacctacgtgcataccggcaccggcaactatcacccggtcacc
gcgcgcatctacaccgacctctcctacttcacctcggatccaaccatcggccgcgatgcc
gcgcgggtgttcaatttcatcaccggctatgccgcgccgagcgatctggaaaagatggcg
gtgtcgccgctgaccctgcgcaaacgcatcatcgaacacatccagggcgaaaccgcgcac
gccaagcacggccgtccgggcgcggtctggatgaagatgaacgcgctggtcgaccctgat
atcatcgatgcgctgtacgaggcctcccaggccggcgtgcaggtcgagctcgtggtgcgc
ggtatctgttgcctgcggcccggcattcctggcctgtccgagaacatccgcgtcaagtcg
atcatcggacgctttctggaacacggccgaatctactgctttggcatgggccagggtctg
ccgagcgccaaagcggctgtgtatatctcgtcagccgacatgatgccgcgcaacctcgac
cgccgcgtcgaggtgctgtgtccgctgcagaatcccacggtgcatcagcaggttctcgaa
cagatcatggtcgcgaacctgaaggacaatgagcaaagctggcaattgttgccggacggg
tcctcaacgcgtatgaagaccgcgaagggcgaagagcctttcaacgtgcacaactacttc
atgacaaatccgagtctgtctggccgtggaaagtcgctcaaggaatcctcgccgcgtcgt
ctcacgcgccggaacgaacgccatcaatcctga
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