Bradyrhizobium amphicarpaeae: CIT40_16050
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Entry
CIT40_16050 CDS
T05700
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIT40_16050 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brq03400
]
CIT40_16050 (uvrA)
DNA repair and recombination proteins [BR:
brq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIT40_16050 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CIT40_16050 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
nSTAND1
AAA_16
DnaJ_CXXCXGXG
BCA_ABC_TP_C
AAA_21
APS_kinase
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AWM01397
UniProt:
A0A2U8PU72
LinkDB
All DBs
Position
3830436..3833420
Genome browser
AA seq
994 aa
AA seq
DB search
MDEVIKAKRQQQNAGSSRHAITIRGAREHNLKNIDVEIPRDKLVVFTGLSGSGKSSLAFD
TIYAEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSKNPRSTVGTVTE
IYDYMRLLWARVGVPYSPATGLPIESQTVSQMVDRVLTLPEGTRLYLLAPVVRGRKGEYR
KELAEWLKKGFQRVKIDGTFHELAEAPTLDKKFPHDIDVVVDRIVVRADIGQRLAESFET
ALKLAEGLAVVEFADAPAAAPAEEKEKKKTAKIHDKSGPERILFSEKFACPVSGFTIPEV
EPRLFSFNNPYGACPACGGLGVEQHVDEDLVIPDKEAAIGKGAIAPWAKSSSPYYTQTLT
ALGKHYKFTLTTRWKDLPKKTQNAILHGSGEDEIKFSYEDGVRSYDTKKPFEGVVTNINR
RYRETESEWAREELAKYFHDVPCEACHGFRLKPEALCVKIGGKHIGEISEMSVKGAGAWF
ETVPEALNTQQNEIAGRILKEIRERLTFLLDVGLNYLTLSRSSGTLSGGESQRIRLASQI
GSGLTGVLYVLDEPSIGLHQRDNARLLDTLKRLRDLGNTVIVVEHDEDAILLADHVLDIG
PGAGMHGGNIIAEGTPAEIMRNPKSLTGKYLTGELEVEVPERRPPNHRRTIKVVNARGNN
LKNVTAEIPLGLFTAVTGVSGGGKSTLLIDTLYKAIARKLNNASEGAAPHDRIEGLEHID
KIIDIDQSPIGRTPRSNPATYTGAFTPIREWFAGLPESKARGYEPGRFSFNVKGGRCEAC
QGDGVIKIEMHFLPDVYVTCDVCKGKRYNRETLEVLFKGKSIADVLDMTVEEAAEFFKAV
PRVRETFQTLHRVGLDYIHVGQQATTLSGGEAQRVKLAKELSKRATGRTLYILDEPTTGL
HFHDVKKLLEVLHELVAQGNTVVVIEHNLEVIKTADWVIDLGPEGGDGGGEIVAWGPPED
IAKAPRSYTGKFLAPVLEKAGKLKRKSAASEAAE
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagtgatcaaggcgaagcgccaacagcagaacgcaggctccagccggcacgca
attacgatccgcggcgcacgcgagcacaacctcaagaacatcgacgtcgagattccccgc
gacaagctggtggtgttcaccggcctctccggctccggcaaatcgtcgctcgccttcgac
accatctatgccgagggccagcgtcgctacgtcgaatcgctgtcggcctatgcccgccag
ttcctcgagatgatgcagaagccggacgtcgaccagatcgacggcctgtcgccggcgatc
tcgatcgagcagaagacgacgtcgaaaaacccgcgctccaccgtcggcaccgtcaccgag
atctacgactacatgcggctgctgtgggcgcgcgtcggcgtaccctattcgccagccacc
ggcctgccgatcgagagccagaccgtctcgcagatggtcgaccgcgtgctgacactgccc
gagggcacccgcctctatctgctcgcgcccgtcgtgcgcggccgcaagggcgagtatcgc
aaggagctcgccgaatggctcaagaagggctttcagcgcgtcaagatcgacggcaccttc
cacgagctcgcggaagcgccgacgctcgacaagaaattcccgcatgacatcgacgtcgtg
gtcgatcgcatcgtggtgcgcgccgatatcggccagcgcctcgccgagagtttcgagacc
gcgctgaagctcgccgaaggccttgccgtcgtcgagttcgccgacgcgccggcggccgcg
cccgccgaggagaaagagaaaaagaagaccgccaagatccacgacaagagcgggcccgag
cggatcctgttctcggagaagttcgcctgccccgtctccggcttcaccatccccgaggtc
gagccgcggctgttctcgttcaacaacccctacggcgcctgtccggcctgcggcggcctc
ggcgtcgagcagcatgtcgacgaggacctcgtcattcccgacaaggaggccgccatcggc
aagggcgcgattgcgccctgggccaagtcgtcctcgccctactacacgcagacgctgacc
gcgctcggcaagcattacaagttcacgctgaccaccaggtggaaggacctgcccaagaag
acgcagaacgcgatcctccacggctccggcgaggacgagatcaagttctcctacgaggac
ggagtgcgctcctacgacaccaagaagccgttcgagggcgtcgtcaccaacatcaaccgc
cgctatcgcgaaaccgagagcgaatgggcgcgcgaggagctcgcgaaatatttccacgac
gtgccctgcgaggcgtgccacggcttccgcctcaagcccgaggcgctctgcgtcaagatc
ggcggcaagcacatcggcgagatctcggagatgtcggtgaagggcgccggcgcctggttc
gagaccgtgcctgaggcgctgaacacgcagcagaacgagatcgccggccgcatcctgaag
gagatccgcgagcggctcaccttcctgctcgacgtcggcctcaactatctcacgctatcc
cgctcctccggcacgttgtccggcggcgagagccagcgtatccgcctcgcctcgcagatc
ggttcgggcctgaccggtgtgctctacgtgctggacgagccctcgatcggcctgcaccag
cgcgacaacgcccgcctgctcgacaccctgaagcggctgcgcgacctcggcaacaccgtg
atcgtggtcgagcatgacgaggacgccatcctgctcgccgaccacgtcctcgacatcggc
cccggcgccggcatgcatggcggcaacatcatcgccgaaggcacgcccgccgagatcatg
cgcaacccgaaatcgctgaccggcaaatacctgaccggcgagctcgaggtcgaggtgccc
gagcgccggccgccgaaccatcgccgcaccatcaaggtcgtcaacgcgcgcggcaacaat
ctcaagaacgtcacggccgaaattccgctcggcctgttcacggcagtcaccggcgtctcc
ggcggcggcaagtcgacgctgctgatcgacacgctttacaaggcgatcgcccgcaagctg
aacaatgccagcgaaggcgccgcgccgcacgaccgcatcgagggcctcgagcacatcgac
aagatcatcgacatcgaccagtcgccgatcggccgcaccccgcgctcgaaccccgccacc
tataccggcgccttcacgccgatccgcgaatggttcgcgggcttgccggagtccaaggcc
cgcggctacgagcccggccggttctccttcaacgtcaagggcggccgctgcgaggcgtgc
cagggcgacggcgtcatcaagatcgagatgcacttcctgcccgacgtctacgtcacctgc
gacgtctgcaaaggcaagcgctacaaccgcgagacgctggaggtcctgttcaagggcaaa
agcatcgccgacgtgctcgacatgaccgtcgaggaagccgccgagttcttcaaggcggtg
ccgcgcgtgcgcgagacgttccagaccctgcatcgcgtcggcctcgactacatccatgtc
ggccagcaggcgaccacgctctccggcggcgaagcgcaacgcgtcaagctcgcgaaagaa
ctgtccaagcgcgccaccggccgcacgctctacatcctggacgagccgaccaccggcctg
cacttccacgacgtcaagaagctgctggaggtgctgcacgagctggtcgcgcagggcaac
accgtcgtcgtcatcgagcacaatctcgaagtcatcaagacggcagactgggtcatcgat
ctcggccccgaaggcggcgacggcggcggcgagatcgtcgcctgggggccgccggaagat
atcgcgaaggcgccgcggagctatacggggaaattcctggcgccggtgctggagaaggcc
gggaagctgaagcggaagagcgcggcgagcgaggcggcggagtaa
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