Bradyrhizobium amphicarpaeae: CIT40_17845
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Entry
CIT40_17845 CDS
T05700
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
brq
Bradyrhizobium amphicarpaeae
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brq03032
]
CIT40_17845 (topA)
03400 DNA repair and recombination proteins [BR:
brq03400
]
CIT40_17845 (topA)
Enzymes [BR:
brq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CIT40_17845 (topA)
DNA replication proteins [BR:
brq03032
]
Prokaryotic type
DNA Topoisomerases
CIT40_17845 (topA)
DNA repair and recombination proteins [BR:
brq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIT40_17845 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Milton
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AWM01713
UniProt:
A0A2U8PV81
LinkDB
All DBs
Position
4209723..4212470
Genome browser
AA seq
915 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSSYEVLASFGHVRDLPAKNGSVDPDANFKMIWEVDPKAAG
RLNDIAKSLKNADRLILATDPDREGEAISWHVLEVLKEKRALKDQKIERVVFNAITKQAV
TDAMKHPRQIDGALVDAYMARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFVAREYWSLIATLLTPRGDAFEARLVGADGKKIQRLDIGTGAEAEDFKKALETA
AYAVTSVDAKPARRNPQAPFTTSTLQQEASRKYGFAPAHTMRIAQRLYEGIDIGGETTGL
ITYMRTDGVQIDPSAITQARKVIGEDYGNAYVPDAPRQYQAKAKNAQEAHEAIRPTDLSR
RPDSMSRKLDSDQARLYELIWKRTIASQMESAELERTTVDITAKAGSRTLELRATGQVVK
FDGFLALYQEGRDDEEDEDSRRLPAMSPNDALKRQSLSVTQHFTEPPPRFSEASLVKRME
ELGIGRPSTYASILQVLKDRGYVKLEKKRLHGEDKGRVVVAFLESFFARYVEYDFTANLE
EQLDRISNNEISWQQVLKDFWTGFIGAVDEIKDLRVAQVLDVLDDMLGQHIYPPRTDGGD
IRQCPNCGTGRLNLKAGKFGAFVGCSNYPECRYTRQLAADGEASADRSLGQDPETGRDVW
VKAGRFGPYIQLGEQKDYAEGEKPKRAGIPKGTSPGDVELELALKLLSLPREIGKHPETG
EPITAGLGRFGPFVKHEKTYASLEAGDEVFDIGLNRAVTLIAEKVAKGPSRRFGADPGKA
IGDHPTLGTVAVKSGRYGAYVTAGGVNATIPSDIEKDAVTLAQAIALIDERAAKGGGKKP
KKAAKPAKAKKAAADGDDAAPKKKPAAKKAAKTKSESTSKARAAVPSTAKTSAVKTSPTK
PAATKAPAKKSAGKT
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgtcattgtggagtcgccggcgaaagccaagacgatcaacaagtatttgggc
tcgtcctatgaggttctggcctcgttcggccatgtccgcgacctgcccgcgaagaacggc
tccgtcgatcccgatgccaatttcaagatgatctgggaggtcgaccctaaggcggccggc
cggctcaacgacattgcgaagtccctgaagaacgccgaccgcctgattctcgccaccgac
cctgatcgtgagggcgaggcaatctcctggcacgtgctggaggtgctgaaggaaaagcgc
gcgctgaaggaccagaagatcgagcgcgtggtgttcaacgccatcaccaagcaggcggtc
acggacgccatgaagcatccgcgccagatcgacggcgcgctggtcgacgcctatatggcg
cgccgtgcgctggactatctggtcggcttcaccctctcccccgtcttgtggcgcaagctg
ccgggcgcccgctcggccggccgggtgcagtcggtcgcgctgcgcctcgtctgcgaccgc
gagctcgagatcgagaagttcgtcgcccgcgaatattggtcgctgatcgcgaccctgttg
acgccgcgcggcgatgccttcgaggcccgcctggtcggcgccgacggcaagaagatccag
cgcctcgacatcggaaccggcgcggaagccgaagacttcaagaaggcgctggagacggcc
gcctacgccgtgacctcggtcgacgccaagcccgcccggcgcaatccgcaggcgcccttc
accacgtcgacgctgcagcaggaagccagccgcaaatacggcttcgcgccggcgcacacc
atgcgcatcgcgcagcggctttatgaaggcatcgacatcggcggcgagaccaccggactc
attacttatatgcggaccgacggcgtgcagatcgacccgtccgcgatcacccaggcccgc
aaggtgatcggcgaggattacggcaacgcctacgtgccggacgcgccacgccagtaccag
gccaaggccaagaatgcgcaggaagcgcacgaagccatccgcccgaccgacctctcacgc
cgccccgacagcatgagccgcaagctcgattccgatcaggcccggctctatgagctgatc
tggaagcgcaccatcgccagccagatggaatccgccgagctcgaacgcaccaccgtcgac
atcacggcgaaggcgggctcccgtacgctggagctgcgcgccaccggccaggtcgtcaag
ttcgacggcttcctcgcgctctaccaggaaggccgcgacgacgaggaggacgaggattcc
cgccgcctgcccgcgatgagcccgaacgatgcgctcaagcggcagtcgctgtccgtcacc
cagcatttcaccgagccgccgccgcgcttctcggaggcctcgctggtcaagcgcatggaa
gagctcggcatcggccggccctcgacctatgcctcgatcctccaggtcctgaaggaccgc
ggctacgtcaagctggagaagaagcgcctgcacggcgaggacaagggccgcgtcgtggtc
gcgttcctcgaaagcttctttgcccgctacgtcgaatacgacttcaccgccaatctggaa
gagcagctcgaccgcatctccaacaacgagatctcctggcagcaggtgctgaaggatttc
tggaccggcttcatcggcgccgtcgacgagatcaaggacctgcgggttgcccaggtgctg
gacgtgctcgacgacatgctcggacagcacatctatccgccgcgcacggacggcggcgat
atcaggcagtgcccgaactgcggcaccggccgtctcaatctcaaggccggcaaattcggc
gccttcgtcggctgctcgaactatccggagtgccgctacacccgccagctcgccgccgat
ggcgaggccagcgccgatcgttcgctcggccaggaccccgagaccggtcgcgatgtctgg
gtcaaggccggccgtttcggcccctacatccagctcggcgagcagaaggattatgcggaa
ggcgagaagccgaagcgcgccggcatcccgaagggcacctcgcccggcgatgtcgagctc
gaacttgcgctgaagctgctgtcgctgccgcgcgagatcggcaagcaccccgagaccggt
gagccgatcaccgcgggcctcggccgcttcgggcctttcgtcaagcatgagaagacctat
gccagcctggaagccggcgacgaggtgttcgacatcggcctcaaccgcgcggtgacgctg
attgcggaaaaggtcgccaagggcccgagccgccgcttcggcgccgatcccggcaaggcg
atcggcgaccatccgacgctcggcaccgtcgccgtgaagagcggccgctacggcgcctat
gtcacggccggcggcgtcaacgcgacgatcccgagcgacatcgagaaagacgccgtcacg
ctggcgcaggcgatcgccctgatcgacgagcgcgccgccaagggcggcggcaagaagccg
aagaaggctgcgaagccggccaaggccaagaaggctgccgcggacggcgatgacgccgcg
ccgaagaagaaaccggccgcgaagaaagcggccaaaaccaaatccgaatccaccagcaag
gcgcgcgccgccgtgccgtcgaccgccaagacttcagcggtcaagacgtcgccgaccaag
cccgccgccaccaaggctccggccaagaagagtgccggcaagacttag
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