Bradyrhizobium amphicarpaeae: CIT40_19415
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Entry
CIT40_19415 CDS
T05700
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq03420
Nucleotide excision repair
brq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIT40_19415
03430 Mismatch repair
CIT40_19415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brq03400
]
CIT40_19415
Enzymes [BR:
brq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CIT40_19415
DNA repair and recombination proteins [BR:
brq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIT40_19415
MMR (mismatch excision repair)
Other MMR factors
CIT40_19415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
AAA_12
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AWM01988
UniProt:
A0A2U8PXP7
LinkDB
All DBs
Position
4516678..4518735
Genome browser
AA seq
685 aa
AA seq
DB search
MATYLDTLNAEQRRAVEHGVADGATVGAPLLVIAGAGSGKTNTLAHRVAHLIVAGADPRR
ILLMTFSRRAAAEMAGRVERIARKVLGENNAAIMRDALTWAGTFHGIGARLLREYAERIG
VDPAFTIHDREDSADLMNLVRHERGLSKTESRFPAKGTCLSIYSRCVNAELEIEKVLGQH
YPWCAGWAAELKGLFAAYVEAKQAQHVLDYDDLLLYWSQMMSDALIAEEIGGRFDHVLVD
EYQDTNRLQSSILLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPQSFSPRAEMITL
DRNYRSTQTVLAAANGVIGLARERFTKNLWTDRTASHKPQLVTVHNEADQARYIVEEVLA
NREQGALLKHQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHVKDVLALLRFAE
NPRDRVAGFRILHLLPGIGPATAQRVLDQMTESADPLAVLGQLPVPARAGDDWTAFVRTV
ENLRYSEWPADLERVRLWYEPHLDRLHEESETRRADLMQLEQIASGYASREKFLTELTLD
PPDATSDKSGPPLRDEDYLILSTIHSAKGQEWKSVFVLNVVDGCMPSDLGAGTSAELEEE
RRLLYVAMTRAKDDLHLVVPQRFFVHGQAAKGDRHVYASRTRFIPEQLVYLFERTAWPKA
AAGAARTAAQGPKVDIGARMRGMWR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacctatctggacacgctcaatgcggagcagcgccgcgccgtcgagcatggcgtg
gccgatggcgcgaccgtgggcgcccccctgctggtcattgccggcgccggctccggcaag
accaatacgctggcccaccgcgtcgcgcatctgatcgtcgccggtgccgatccgcgccgc
atcctgctgatgacgttctcccgccgcgcggcggccgagatggccggccgggtcgagcgc
atcgcccgcaaggtgctcggggagaacaacgccgcgatcatgcgcgatgccctcacctgg
gccggcaccttccatggcatcggcgcgcggctgctgcgcgaatatgccgaacggatcggc
gtcgatcccgccttcaccatccacgaccgcgaggattccgccgacctgatgaacctggtc
cggcacgagcgtggcctgtcgaagaccgagagccgctttcccgccaagggcacctgcctg
tcgatctactcgcgctgcgtcaacgccgagttggagatcgagaaggtgctcggccaacac
tacccctggtgtgcggggtgggctgccgagttgaagggactgttcgcggcttacgtcgag
gccaagcaggcccagcacgtgctcgattacgacgatctgctgctctattggtcgcagatg
atgagcgatgcgctgatcgccgaggagatcggcggccgcttcgatcacgtgctggtcgac
gagtaccaggacaccaaccgccttcaatcctcgatcctgctggcgctcaagcccgacgga
cgcggcctcaccgtggtcggcgacgacgcccagtcgatctattcgttccgcgctgccacg
gtccgcaacatcctggactttccgcagagcttctcgccgcgcgcggagatgatcacgctc
gaccgcaactaccgctcgacgcagaccgtcctggcggcggccaacggcgtcatcgggctc
gcgcgcgaacgcttcaccaagaatctctggaccgaccgcaccgcctcgcacaagccgcag
ctcgtcaccgtgcataacgaggccgaccaagcgcgctacatcgtcgaggaggtgctggcg
aaccgcgagcaaggcgcgctgctcaagcaccaggcggtgctgttccggacgtcctcgcat
tccggcccgctcgagatcgagctgacccggcgcaacattccgttcgtgaagttcggcggg
ctgaaattcctcgatgccgcgcatgtcaaggacgtgctggcgctgctgcggtttgccgaa
aatccgcgcgaccgcgtcgccggtttccgcatcctgcatctgttgccgggcatcgggccc
gcgaccgctcagcgcgtgctcgaccagatgacggagagcgccgacccgcttgccgtgctc
ggccagctgccggtgcccgcaagggccggcgacgactggaccgccttcgtccgcaccgtc
gagaatttgcgttactcggaatggccggccgatctcgaacgcgtgcggctgtggtacgag
ccgcatctcgatcgcctccacgaggagtccgagacgcgccgcgccgatctgatgcagctc
gagcagatcgcgagcggctatgccagccgcgaaaagttcctgaccgagctcacgctcgac
ccgccggatgcgaccagcgacaaatccgggccgccgttgcgcgacgaggactatctgatc
ctctcgaccatccactcagccaagggccaggagtggaaatcggtgttcgtgctcaacgtc
gtcgacggctgcatgccgtcggatctcggcgccggcacctctgccgaattggaagaggag
cgccgcctgctctatgtcgcgatgacgcgcgccaaggacgatctgcatctcgtcgtgccc
cagcgcttcttcgtccacggccaggccgccaagggcgaccgccacgtctacgcttcacgc
acccgcttcattccggagcaactggtctacctgttcgaacgcaccgcctggccgaaggcc
gccgcaggtgctgcccgcaccgcggcgcaggggccgaaggtcgacatcggggcgcggatg
cgcgggatgtggcggtag
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