Bradyrhizobium amphicarpaeae: CIT40_24865
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Entry
CIT40_24865 CDS
T05700
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq00470
D-Amino acid metabolism
brq00550
Peptidoglycan biosynthesis
brq01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CIT40_24865 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CIT40_24865 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
brq01011
]
CIT40_24865 (murD)
Enzymes [BR:
brq01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CIT40_24865 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
brq01011
]
Precursor biosynthesis
Amino acid ligase
CIT40_24865 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
KARI_N
2-Hacid_dh_C
AdoHcyase_NAD
ADH_zinc_N
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AWM02945
UniProt:
A0A2U8PZI9
LinkDB
All DBs
Position
complement(5690607..5692004)
Genome browser
AA seq
465 aa
AA seq
DB search
MIPVTSFAGKTVAVFGLGGSGLASCHALKAGGAEVIAADDNAENVAKAVQAGFITADLRN
VSWANFAALVLAPGVPLTHPVPHWSVLKAREAGVEVIGDIELFCRERRRHAPNAPFVAIT
GTNGKSTTTALIAHLTKVAGYDTQMGGNIGTAILSLEPPRMGRVHVIEMSSYQIDLTPSL
DPSVGILLNVSEDHIDRHGTIEHYAAVKERLVAGVQDGGAAIVGVDDGFCRDIADRLDRA
GKNVVRISVKNPLASGIHVEHGNIVRTSGGARSDIAALGGIGSLRGQHNAQNAACAAAAA
LAIGISLDVLQNGLRSFPGLAHRMEQVGRRGNVLFVNDSKGTNADATAHALSSFGDIFWI
AGGKPKAGGITGLTGYFPRIRKAYLIGEAAQEFSGTLGTVAHEISHTLDVAVDHAARDAE
AAGLADAVVLLSPACASFDQYRNFEIRGTKFRELVQALPGVKPVA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgtcacgtcctttgccggcaagaccgtcgcggtgttcggcctcggcggctcg
gggctcgcctcctgccacgcgctgaaggccggcggtgccgaggtgatcgctgccgacgac
aatgccgagaacgtcgccaaggccgtgcaggcaggtttcatcaccgccgatctgcgcaac
gtgtcgtgggcgaattttgcagcgctcgtgcttgcgcccggcgtgccgctgacccatccg
gtgccgcattggagcgtgctgaaggcgcgcgaggcaggcgtcgaggtgatcggcgacatc
gagctgttctgccgggaacgccgccgccacgcaccgaacgcgccgttcgtcgccatcacc
ggcaccaacggcaaatccaccacgacggcgctgatcgcgcatctcacgaaggtcgccggc
tacgacacccagatgggcggcaatatcggcaccgcgatcctgtcgctggagccgccgcgg
atgggccgcgtccacgtcatcgagatgtcgtcctaccagatcgacctcacgccttcgctc
gatccctccgtcggcatcctgctgaacgtcagcgaggaccacatcgatcgccacggcacc
atcgagcactatgccgcggtgaaggaacgcctggttgccggcgtgcaagacggcggcgcc
gcgatcgtcggcgtcgacgacggtttttgccgcgacatcgccgaccggctcgaccgcgcc
ggcaagaatgtggtgcgcatctccgtcaagaacccgctggcgtcaggcatccatgtcgag
cacggcaatatcgtgcgcacctcgggcggcgcccgcagcgatatcgcagcgctcggcggc
atcggttcgctgcgcggccagcacaacgcgcagaacgcggcctgcgctgcggccgccgcg
ctcgcgatcggcatcagcctggatgtgctgcagaacggcctgcgcagctttcccggcctc
gcccaccgcatggagcaggtcggccgccgcggcaacgtgctgttcgtcaacgactccaag
ggcaccaacgcggacgccaccgcgcatgcgttgtcgtcgttcggcgacatcttctggatc
gccggcggcaagccgaaggccggcggaatcaccggcctgaccggctatttcccgcgtatc
cgcaaggcctatctgatcggcgaggccgcgcaggagttttcgggaacgctgggtacggtg
gcgcatgagatcagccacaccctcgacgtcgccgtcgatcacgccgcgcgcgacgcggaa
gccgcgggcctcgccgacgccgtcgtgctgctgtcgcccgcttgcgcgtcgttcgaccag
taccgcaacttcgaaatccgcggcaccaagttccgcgagctggtgcaggcgctgccgggc
gtgaagccggtggcgtga
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