Bradyrhizobium amphicarpaeae: CIT40_25160
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Entry
CIT40_25160 CDS
T05700
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq00730
Thiamine metabolism
brq01100
Metabolic pathways
brq01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
CIT40_25160 (thiC)
Enzymes [BR:
brq01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
CIT40_25160 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AWM02995
UniProt:
A0A2U8PZP0
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All DBs
Position
5752645..5754543
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AA seq
632 aa
AA seq
DB search
MNIRSNPEKTVPAVTTGPLPSSRKIFASPDAAPDLRVPLREIILSEGAGEPNLPVYDTSG
PYTDPSVTIDVNAGLARGRKAWVLERGGVEEYQGRQVKPEDNGSVSTDKAARAFSAYHQP
LRGLDGHKITQLEFARAGIVTKEMIYVAARENLGRKQQLDRAEAALADGESFGASVPAFI
TPEFVRDEIARGRAIIPCNINHSELEPMIIGRNFLTKINANIGNSAVTSSVEEEVEKMVW
AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCNGDPVKLTWELYKDT
LIEQCEQGVDYFTIHAGVRLSYIHLTASRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDE
ICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWDKGCQVMIEGPGHV
PMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP
KEHLGLPDRNDVKTGVITYKIAAHASDLAKGHPAAQLRDDALSRARFDFRWSDQFNLGLD
PETAKNFHDETLPKEAHKVAHFCSMCGPKFCSMKITQDVRDYAATLNDPAAVGMSMSGTA
EDGMAKMSAKFKEMGSSVYLDAEKVKESNRVL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccgctccaaccctgagaaaaccgtccccgccgtcaccaccggcccgcttccc
tcctcgcgaaagatcttcgcctcgcccgacgccgcgcccgatctccgcgtacccctgcgc
gagatcatcctgtccgaaggcgccggcgagccgaacctgccggtgtacgacacctccggc
ccctacaccgatccttccgtgaccatcgacgtcaacgccggtctcgcccgcggccgcaag
gcctgggtgctggagcgcggcggcgtcgaggaatatcagggccggcaggtcaagcctgag
gacaatggcagcgtctccaccgacaaggccgcgcgcgcgttcagcgcctatcaccagccg
ctgcgcggcctcgacggccacaagatcacccagctcgaattcgcccgcgccggcatcgtc
accaaggagatgatctacgtcgccgcgcgtgaaaacctcggccgcaagcagcagctggac
cgcgcggaagcagcgctcgccgacggcgagagcttcggcgcctcggtgcccgccttcatc
acgccggagttcgtgcgcgacgagatcgcgcgcggccgcgccatcatcccctgcaacatc
aaccactcggaactcgagccgatgatcatcggccgcaacttcctgaccaagattaacgcc
aacattggcaactcggcggtgacctcttcggtcgaggaagaggtcgagaagatggtgtgg
gcgatccgctggggcgccgacaccgtgatggacctctcgacgggccgcaacatccacacc
acccgcgaatggattttgcgcaactcgccggtgccgatcggcacggtgccgatctaccag
gcgctggagaagtgcaacggcgatcctgtcaagctgacctgggagctctacaaggacacg
ctgatcgagcagtgcgagcagggcgtcgactatttcaccatccacgccggcgtgcgcctg
tcctacatccacctcaccgccagccgcgtcaccggcatcgtctcgcgcggcggttcgatc
atggcgaagtggtgcctggcgcatcacaaggaaagcttcctctacacgcatttcgacgag
atctgcgacctcatgcgcaagtatgacgtctcgttctcgctcggcgacggcctgcgcccc
ggctcgatcgcggacgccaacgaccgtgcgcagttcgccgagttggagacgctcggcgag
ctcaccaagatcgcgtgggacaagggttgccaggtcatgatcgaaggccccggccacgtg
ccgatgcacaagatcaagatcaacatggacaagcagctcaaggagtgcggcgaagcgccg
ttctacacgctcgggcccctgaccaccgacatcgcgccgggctacgaccacatcacgtcg
gggatcggcgccgccatgatcggctggttcggctgcgccatgctctgctacgtcacgccg
aaggagcatctcggcctgcccgaccgcaacgacgtcaagaccggcgtcatcacctacaag
atcgccgcccacgcctccgacctcgccaagggccacccggccgcgcagctccgcgacgac
gcgctctcccgcgcccgtttcgacttccgctggagcgaccagttcaacctcggcctcgac
cccgagaccgccaagaacttccacgacgagaccctgccgaaggaagcccacaaggtcgcg
catttctgctcgatgtgcggcccgaaattctgctcgatgaagatcacgcaggacgtgcgg
gattatgcggcaacgctgaatgacccggcggcggtgggcatgtcgatgagcgggacggcc
gaggacggcatggcgaagatgagtgcgaagttcaaggagatggggagcagcgtttatctg
gatgcggagaaggtgaaggagagtaatcgggtgttgtaa
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