Bradyrhizobium amphicarpaeae: CIT40_25175
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Entry
CIT40_25175 CDS
T05700
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIT40_25175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brq03400
]
CIT40_25175
Enzymes [BR:
brq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CIT40_25175
DNA repair and recombination proteins [BR:
brq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIT40_25175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AWM04876
UniProt:
A0A2U8Q421
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All DBs
Position
5755851..5756393
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AA seq
180 aa
AA seq
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MLVPTPHRLPDQLRPDLRLVFVGTAASTRSAELGHYYAHPGNRFWRALHEAGITPRRYQP
GEFASLIALGIGFTDLSKTGAGMDHQIAAETIDVPGFRAKMETYRPRTIAFTSKKAASLF
YRRPSSGIALGRQPRDESLPEIFVLPSPSGAASGHWTIEPWRELAAWIAALDAQHPQTSS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
ttgctcgtgcccacgccccaccgcctccccgaccagctccgccccgacctccgcctcgtc
ttcgtcggcaccgccgcctcgacgcgctcggccgaactcgggcactattacgcccatccc
ggcaaccgcttctggcgcgcgctgcatgaggccggcatcacgccgcggcgctatcagccg
ggcgagttcgcatcgctgatcgcgctcgggatcggcttcaccgatctttccaagacgggc
gccggaatggatcaccagatcgcggcggagacgatcgacgtgccgggcttcagagcgaag
atggagacgtaccggccgcggacgattgcgttcacgagcaagaaggcggcgagcttgttt
tatcgcaggccgtcgagcgggattgcgctgggacggcagccgcgcgatgagagcttgccg
gagatcttcgtgctgccgtcgccgtcgggcgcggcgtccgggcactggacgatcgagcca
tggcgcgagttggcggcgtggatcgctgcactcgacgcacaacacccacagacctcatcc
tga
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