Bradyrhizobium amphicarpaeae: CIT40_28060
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Entry
CIT40_28060 CDS
T05700
Symbol
pimA
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq00061
Fatty acid biosynthesis
brq00071
Fatty acid degradation
brq01100
Metabolic pathways
brq01212
Fatty acid metabolism
brq02024
Quorum sensing
brq04146
Peroxisome
Module
brq_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CIT40_28060 (pimA)
00071 Fatty acid degradation
CIT40_28060 (pimA)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CIT40_28060 (pimA)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CIT40_28060 (pimA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
brq01004
]
CIT40_28060 (pimA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
brq04147
]
CIT40_28060 (pimA)
Enzymes [BR:
brq01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CIT40_28060 (pimA)
Lipid biosynthesis proteins [BR:
brq01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CIT40_28060 (pimA)
Exosome [BR:
brq04147
]
Exosomal proteins
Exosomal proteins of breast milk
CIT40_28060 (pimA)
Exosomal proteins of breast cancer cells
CIT40_28060 (pimA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AWM04925
UniProt:
A0A2U8Q6G2
LinkDB
All DBs
Position
complement(6348933..6350609)
Genome browser
AA seq
558 aa
AA seq
DB search
MTHPGEQFYPEGVRWDDPIVQGSLPDLLSKAAADYGPRTALEFRDRPITYTELAAQAERA
AAAFLRAGIGKGNSVALFLGNTPDHPVNFFGALKAGARVAHLSPLDGEIALTHKVSDSGS
RLLVTSNLQALLPTALKFLEKGLIDRLVVCEDDHWGKVGTPQAAIPDDHRIVTFRTFVEG
ATAPAQWPSVTADDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPGRATRGDVI
ERVICVLPLFHIYALTVVLLSSLSRGNLISLHQRFDVEAVMRDIEVKRATYFPGVPTMWI
AIAALPDLDKRDFSSLATIGSGGAPLPVEIANFFERKVGKKLKSGWGMTETCSPGTGHPP
TGPEKPGSIGLMLPGIELDVVALDDPRCVLPPGEVGEIRIKGPNVTKGYWNRPEGSADAF
VDGRFLTGDIGYVDADGYFFLVDRKKDMIISGGFNVYPQMIEQAIYTIAGVHEVIVLGIP
DQYRGEAAKAFIKLKPGVTPFALEELRNQLAGKVGKHELPAEVEFVDDLPRTPVGKLSRH
ELRQQQKPSQSTQPGGRS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcccggcgaacagttttaccccgagggcgtgcggtgggacgatcccatcgtc
cagggctcgctgcccgacctgctgtcgaaggccgccgccgattacggcccgcgtaccgcg
ctggaattccgcgatcgcccgatcacctacaccgagctcgcagctcaggccgagcgcgcg
gcagcggcattcctgcgcgcaggcatcggcaagggcaattcggtcgcgctgttcctcggc
aatacgccggaccaccccgtcaatttctttggcgcgctgaaggcgggcgcccgcgtcgcg
catctgtcgccgctcgacggcgagatcgcgctgacgcacaaggtgtcggattccggctcg
cgcctgctcgttacctcgaacctccaggccctgctgccgaccgcgctgaagttccttgaa
aaggggctgatcgatcgcctcgtcgtctgcgaggacgatcattggggcaaggtcggcacg
ccgcaggcggcgatcccggatgatcaccgcatcgtcaccttcaggaccttcgtcgagggg
gcgacagcaccggcacaatggccgtcggtcacggccgacgacgtcgcgctgctgcaatac
accggcggcaccaccgggctgcccaagggcgcgatgctcacgcacggcaatctcacctcc
gcggtgtcgatctacgacgtctggggcaagcctggccgcgccacgcgcggcgacgtgatc
gagcgcgtgatctgcgtgttgccgctgttccacatctacgcgctcaccgtcgtgctgctg
tcctcgctcagccgcggcaatctgatctcgctgcatcagcgcttcgacgtcgaggccgtg
atgcgcgacatcgaggtcaagcgcgcgacgtattttccgggcgtgccgacgatgtggatc
gcgatcgcggcgctccctgatctggacaagcgtgacttctcctcgctggcgaccatcggc
tccggcggcgcgccgctgcccgtggagatcgcgaacttcttcgagcgcaaggtcggcaag
aagctgaagagcggctggggcatgaccgagacctgctcgcccggcaccggccatccgccc
accggcccggagaagcccggctcgatcggcctgatgttgcccggcatcgagctcgacgtg
gttgcgctggacgatccgagatgtgtgctgccgccgggtgaagtcggcgagatccgcatc
aagggcccgaacgtcaccaaggggtactggaacaggccggagggatccgccgatgccttc
gtcgatggccgcttcctcaccggtgacatcggctatgtcgacgccgacggttatttcttc
ctggtcgaccgcaagaaggacatgatcatctccggcggcttcaacgtctatccgcagatg
atcgagcaggcgatctacaccattgctggcgtgcacgaggtgatcgtgctcggcatcccc
gaccagtaccggggcgaggcggcgaaggccttcatcaagctcaagcctggcgtcacgccg
ttcgcgctcgaggagctgcgcaaccagctcgccggcaaggtcggcaagcacgaattgccg
gccgaggtcgagttcgtcgacgatttgccgcgtacgccggtcggaaaattgtcgcgccac
gaattgcgccagcagcagaaaccgtcacaatccacgcaaccaggaggtcgctcttga
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