Bradyrhizobium amphicarpaeae: CIT40_29660
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Entry
CIT40_29660 CDS
T05700
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
brq
Bradyrhizobium amphicarpaeae
Pathway
brq03030
DNA replication
brq03410
Base excision repair
brq03420
Nucleotide excision repair
brq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CIT40_29660 (polA)
03410 Base excision repair
CIT40_29660 (polA)
03420 Nucleotide excision repair
CIT40_29660 (polA)
03440 Homologous recombination
CIT40_29660 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brq03032
]
CIT40_29660 (polA)
03400 DNA repair and recombination proteins [BR:
brq03400
]
CIT40_29660 (polA)
Enzymes [BR:
brq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CIT40_29660 (polA)
DNA replication proteins [BR:
brq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CIT40_29660 (polA)
DNA repair and recombination proteins [BR:
brq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CIT40_29660 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIT40_29660 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
AWM03782
UniProt:
A0A2U8Q1F5
LinkDB
All DBs
Position
6678322..6681378
Genome browser
AA seq
1018 aa
AA seq
DB search
MPKSSPKTSAKADTKASVDTKSAAPAAAKPVAAKAAGKGDHIFLVDGSGYIFRAYHALPP
LNRKSDGLQVNAVLGFCNMLWKLLRDMPADNRPTHLAIVFDKSEVTFRNNIYPEYKAHRP
PAPDDLIPQFALIREAVRAFDLPCLEQGGFEADDLIATYARQASERGATTTIVSSDKDLM
QLVNDKIMMYDTMKDRRIGIPEVIEKFGVPPEKVVEVQALAGDSTDNVPGVPGIGIKTAA
QLITEYGDLEQLLFRATEIKQPKRREALIENAEKARISRKLVLLDDKVKLDVPLDDLAVH
EPDARKLIAFLKAMEFTTLTRRVADYSQIDPANVDADASNSSGARAGDGAAKAKSSEASG
DLFAAPAATATGGDKGDKGASLKGAPISLAAAREEALRKLPVDRDKYQTIKSLKELNGFI
ARIHDAGHVAVEIRGNSIDPMQADLCGIALSLAPNEACYVPLAHKQAGGGAGLFDAGLAP
DQVKHADAIEALRPVLESAGILKIGFDLKFTAVMLAQHGITLRNTDDAQLISYVLDAGRG
SHAIESLSERWFGHAMLKESELLGSGKGKITFDQVPIDKAAALSAEGADMALRAWRVLKP
RLVAEHMTTVYETLERPLVSVLARMERRGISIDRQVLSRLSGDFAQTAARVEAEIQEIAG
EPVNVGSPKQIGDILFGKMGLSGGTKTKTGAWSTTAQVLDELAEQGHDFPRKILEWRQVS
KLKSTYTDALPTYVNPQTHRVHTTYALAATTTGRLSSNEPNLQNIPVRTEDGRKIRRAFI
ATPGHKLVSADYSQIELRLLAEIADIPVLKQAFKDGLDIHAMTASEMFGVPIKGMPSEIR
RRAKAINFGIIYGISAFGLANQLGIAREEASAYIKKYFERFPGIRAYMDETRNFCRSHGY
VTTLFGRKMHYPDIKASNASVRAFNERAAINARLQGTAADIIRRAMTRVEDALAEKKLSA
QMLLQVHDELIFEVPDAEVEATLPVVQHVMQDAPFPAVLLSVPLHVDARAANNWDEAH
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagctccccgaagacctccgccaaggctgataccaaggcctccgttgacacc
aaatccgccgcgccagctgctgccaaaccggttgcggccaaggcggcgggcaagggcgac
cacatcttcctggtcgacggttccggctacatcttccgcgcctaccacgcgctgccgccg
ctcaaccgcaagtccgacgggctgcaggtcaacgccgtgctcggcttctgcaacatgctg
tggaagctgctccgcgacatgcccgccgacaaccggccgacgcatctggccatcgtgttc
gacaagtccgaggtcacctttcgcaacaacatctatcccgagtacaaggcgcaccggccg
ccggcgcctgacgatctgatcccgcaattcgcactgatccgcgaagcggtgcgcgccttc
gacctgccctgcctggaacaaggcggcttcgaggccgacgacctgatcgcgacctatgcg
cggcaagccagcgaacgcggcgccaccacgaccatcgtgtcctccgacaaggatctgatg
cagctcgtgaacgacaagatcatgatgtacgacaccatgaaggatcgccgcatcggcatc
cccgaggtgatcgagaagttcggcgtgcccccggagaaggtggtcgaggtgcaggcgctg
gccggcgactccaccgacaacgtgcccggcgtgccgggcatcggcatcaagaccgccgcg
cagctgatcaccgaatatggcgacctcgagcaattgctgttccgcgccaccgaaatcaag
caaccgaagcggcgcgaggcgctgatcgagaatgccgagaaggcgcgaatctcgcgcaag
ctggtgctgctcgacgacaaggtgaagctggacgtgccgctggacgatctcgccgtccac
gagcccgacgcgcgcaagctgattgccttcctaaaggcgatggaattcaccacgctgacg
cgccgtgtcgccgactactcccagatcgaccccgccaacgtcgatgccgatgcgagcaac
agcagcggcgccagggccggcgacggcgccgccaaggcgaaatcgtccgaggcttccggc
gatctcttcgccgcgcctgcggccaccgcaacaggcggcgacaagggcgacaagggggcg
agcctgaagggcgcgccgatctccctggccgccgcgcgcgaagaggcgctgcgcaagctt
ccagtcgatcgcgacaaatatcaaacgatcaagtcgctcaaggagctcaacggcttcatt
gcgcgcatccacgatgccggtcatgtcgcagtcgagatccgcggaaattcgatcgatccg
atgcaggccgacctctgcggcatcgcgctgtcgctggcgccgaacgaggcctgctatgtg
ccgctggcgcacaagcaagctggcggcggcgccggcctgttcgacgccggcctcgcgccc
gatcaggtcaagcatgccgatgcgatcgaggcgctgcggccggtgctggaatcggcgggc
attctcaagatcggcttcgatctcaaattcaccgccgtcatgctggcgcagcacggcatc
accttgcgcaacaccgacgatgcgcagctgatctcctatgtgctcgatgccggccgcggc
tcgcatgcgatcgaatcactgtccgagcgctggttcggccacgccatgctgaaggagagc
gaactgctcggtagcggcaagggcaagatcaccttcgaccaggtgccgatcgacaaggcc
gcggcgctgtcggccgaaggcgccgacatggccttgcgtgcctggcgcgtgctgaagccg
cgcctggtcgccgagcatatgaccacggtctacgagacgctggagcggccgctggtgtcg
gtgcttgcgcgcatggaacggcgcggcatctcgatcgaccgccaggtgctgtcgcggctc
tccggtgacttcgcccagacggcggcacgcgtcgaggccgagatccaggagatcgcaggc
gagccggtcaatgtcggcagccccaagcagatcggcgacatcctgttcggcaagatgggc
ttatcgggcggcaccaagaccaagaccggcgcgtggtccaccaccgcccaggtgctcgac
gagctcgccgagcagggccacgattttccgcgcaagatcctggagtggcgccaggtctcg
aaactgaaatcgacctataccgacgcgctgccgacctatgtcaatccgcagacccatcgc
gtgcacacgacctacgcgctggccgcgaccacgacgggccggctgtcgtcgaacgagccg
aacctgcagaacatccctgttcgtaccgaggacggccgcaagatccgtcgcgctttcatc
gcgacaccggggcacaagctggtctccgccgactattcgcagatcgaactcaggctactc
gccgagatcgccgacattcccgtgctgaagcaggcattcaaggacgggctcgacattcac
gccatgaccgcgtcggaaatgttcggggtgccgatcaagggcatgccgagcgagattcgc
cgccgcgccaaggcgatcaatttcggcatcatctacggcatctcggccttcggcctcgcc
aaccagctcggcatcgcgcgcgaggaggcctcggcctacatcaagaaatatttcgagcgc
ttccccggcatccgcgcctacatggacgagacgcgcaacttctgccgcagccatggctac
gtcaccacgctgttcggccgcaagatgcactaccccgacatcaaggcctccaatgcctcg
gtgcgcgccttcaacgagcgcgccgcgatcaatgcccggctgcagggcaccgcggccgac
atcatccgacgcgccatgacccgcgtcgaggatgcgctcgccgagaagaagctgtcggcg
cagatgctgctgcaggtgcatgacgaattgatcttcgaggtgcccgacgccgaagtcgag
gcgacgctgccggtcgtgcagcacgtgatgcaggacgcgccgttcccggccgtgctgctc
tcggtgccgctgcatgtggatgcgcgcgccgcgaacaattgggacgaggcgcattga
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