Bradyrhizobium amphicarpaeae: CIT40_31505
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Entry
CIT40_31505 CDS
T05700
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
brq
Bradyrhizobium amphicarpaeae
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
brq03016
]
CIT40_31505 (truB)
Enzymes [BR:
brq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CIT40_31505 (truB)
Transfer RNA biogenesis [BR:
brq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CIT40_31505 (truB)
Prokaryotic type
CIT40_31505 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AWM04990
UniProt:
A0A2U8Q4C5
LinkDB
All DBs
Position
55419..56555
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AA seq
378 aa
AA seq
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MTMDPAHDTISGEQADQRDVQKNNFADDNFAGSGGGSQPHQEPRRVNNDPRANTRQKGNQ
VRRDRRDVHGWVVLDKPIGMTSTQAVAVLKRLFNAKRAGHAGTLDPLASGGLPIALGEAT
KTVPFVMDGRKRYQFTVCWGEERDTDDIEGRVTATSDQRPTREAILALLPRFTGVIEQIP
PRYSAIKVQGERAYDLARDGEIVELAARPVEIHHLTLVDQPDNDHAVFEAECGKGTYVRA
LARDMGRILGTFGHICALRRTLVGPFGENDMIPLDQLEALCDRAASGEGSLADALMPVET
ALDDIPALAVTRADAARLHRGQAVLLRGRDAPISSGTVYVTVAGRLLALAEVGNGEIIPK
RVFNLTGLTASTGRNERN
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacgatggacccggctcacgacacgatcagcggcgaacaggccgatcagcgcgacgtg
cagaaaaataattttgcggacgataattttgcgggctcgggcggcggttcgcagccgcac
caggagccgcgccgcgtcaacaacgatccgcgcgccaacaccaggcagaagggcaaccag
gtccgccgcgaccggcgcgacgtccatggctgggtcgtgctcgacaagccgatcgggatg
acatcgacgcaagccgtggccgtgctcaagcgcctgttcaatgccaagcgcgccggacac
gccggaacgctggatccgctcgcctccgggggcctgccgatcgcgctcggggaagccacc
aagaccgttcccttcgtcatggacggccgcaagcgctaccagttcacggtgtgctggggt
gaggagcgcgacaccgacgacatcgagggccgggtcaccgcgacctccgaccagcgcccg
acccgcgaggccatcctggccctgttgccccgcttcaccggggtaatcgagcagattccg
ccgcgttattccgcgatcaaggtccagggcgagcgcgcctatgatctcgcccgcgacggc
gaaatcgtggaactggcggcccgtccggtcgagattcaccatttaacccttgtggatcaa
ccggataacgaccacgccgtgttcgaggccgaatgcggcaagggcacctatgtccgggca
ctggcccgcgatatgggccggattctcggcactttcggccatatctgcgcgctcaggcgg
accctggtcggcccatttggcgaaaacgacatgattccactggatcagctggaggctttg
tgcgatagagccgcgtccggcgagggtagcctcgcggacgcgcttatgcccgttgagacc
gcgctggacgacatcccggcactggccgtcactcgggctgatgcggcaaggctccatcgg
ggccaagccgttttattgcgcggacgggatgcgcccattagtagcggcacagtctatgtc
acggtggcaggccgccttttggcgcttgccgaagtcggcaatggcgaaatcatccccaag
cgtgtgttcaacctgaccggcttgactgcctcaaccggtcgcaacgagagaaattga
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