Bradyrhizobium amphicarpaeae: CIT40_31660
Help
Entry
CIT40_31660 CDS
T05700
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
brq
Bradyrhizobium amphicarpaeae
Brite
KEGG Orthology (KO) [BR:
brq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brq03400
]
CIT40_31660 (addB)
Enzymes [BR:
brq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CIT40_31660 (addB)
DNA repair and recombination proteins [BR:
brq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CIT40_31660 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AWM04140
UniProt:
A0A2U8Q223
LinkDB
All DBs
Position
92050..95196
Genome browser
AA seq
1048 aa
AA seq
DB search
MRVFSVPLSVPFLRTIVASLLEGRLVEGFEARKEPARLADATLYLPTRRAMRVVREIFLD
EMKADAVVLPRIVALGDIDEDELAFADEGEQFSGATPLDIPPRLGELERRLTLAQLVAAW
AKGPVLSPLVVGGPASTLALAGDLARLIDDMVTRGVDWGALDGLVPDMLDRYWQHSLEFL
RIARIAWPGHLAEINRIEPAARRDLLIAAEAKRLTAHPTGPVIAAGSTGSMPATAKFLHA
VASLPHGAVVLPGLDTDLDDDAWRSIGGVRDSLGKFAEHPASNHPQYAMHALLDRFGIKR
SDVEILQPPAGGGRDLLASESMRPSATTEIWHDRLKQPDVAARIAGGMKNLAVVEAPNPE
MEALAIAIAMREARHLDKSAALVTPDRALARRVMAALTRWDLAFDDSGGDVLMETSAGVF
ARLAAEAATKGLEPPTLLAMLKHPLCRLGRLPGAWRAAIEDLELAVLRGTRPPAGTAGLL
REFNRFREELAKLWRSETSALHKAEPRARLKAEDLDRIQALIDVLQKALAPIESLVSPKP
FDFAELAHRHREIMIELSRDEQGFPLAFEEREGLALAGAFDDLLRGGTTSGLMVTLPDYP
DVFQTAFSDRAVRRRDKPGARLQIYGPLESRLMQADRIIIGGLIEGVWPPAPRIDPWLSR
PMRHELGLDLPERRIGLSAHDFAQLLGGGEVILTHSAKAGGAPAVASRFLHRLEAVAGDD
HWKAAVRAGEKYVQFAAALDQPAEVRPVKQPEPRPPRATRPLRMSVTAIEDWLRDPYTIY
AKHILRLDALDPVDMPLSAADRGSAIHEAIGEFTKNYATRLPDDPARVLRAIGERHFAPL
MERPEARALWWPRFQRIARWFGEWESARRDALGAIVAETRGEISIRLDHERSFRLSARAD
RIERRQGGGYAILDYKTGQPPTGKQVRMGLSPQLTLEAAILREGGFPDIDAGASVSQLVY
VRLSGNNPPGEERILELKYKQGDEPQPPDTAAAEARAKLEALIRAFDDENQPYTSLNLPM
WTNRYGTYDDLARIKEWSAAGGLGIEEW
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcttcagcgtccccctctcagttccattcctgcgcacgatcgtcgcgagcctg
ctcgagggacggctggtcgagggattcgaggcccgcaaggaaccggcgcggctggcggat
gccacgctatacctgccaacccgtcgcgcgatgcgtgtggtccgcgagatcttcctcgac
gagatgaaggcggacgcggtggtgctgccgcgcatcgtcgcgctcggcgacatcgatgag
gatgagctcgctttcgccgatgaaggcgagcagttctccggcgcgacgccgctcgacatt
ccgccgcggcttggcgaactcgaacgacggctgacgctggcacaactggtcgcggcctgg
gccaaggggccggtgctgtcgccgctggtggtcggcgggcctgcttcgacgctggctctc
gccggcgacctcgcgcgcctgatcgacgacatggtgacgcgaggcgtcgactggggcgcg
ctcgacggtctcgtgcctgacatgctcgaccgctactggcaacactcgctcgaattcctg
cgcatcgcgcgcatcgcctggcccggtcatctcgccgagatcaaccggatcgagccggca
gcgcggcgcgatctcctgatcgcagcggaagccaaacggctgaccgcacatccgaccggt
cccgtgatcgcggcgggttcgaccggctcgatgccggcgaccgcgaaattcctgcacgca
gtcgcatcgctgccccatggcgccgtggtgctgccgggcctcgacaccgatctcgacgac
gacgcctggcgcagcatcggcggcgtgcgcgattcgctcggcaagttcgcggagcatccg
gcctcgaaccatccgcaatacgccatgcacgcgctgctggatcgtttcggcatcaaacgc
agtgacgtcgagatcctccagccgccggcaggaggcggccgcgatctgctcgcgtccgaa
tcgatgcggccgtccgccacgacggagatctggcacgaccggctgaagcagccggatgtc
gccgcaaggatagccggcggcatgaagaaccttgccgtcgtcgaagctcccaatcctgaa
atggaagcgcttgccattgccattgcgatgcgcgaggcgcggcatctcgacaaatccgca
gcgctggtgacgcccgaccgcgcgctggcgcggcgcgtgatggccgcactcacgcgctgg
gatctggcgttcgacgattccggcggcgacgtgctgatggaaacctccgccggcgtcttt
gcacgtctcgcagcggaagccgccaccaagggactggagccgccgacgctgctggcgatg
ctgaagcatccgctgtgccggctcggccggctgcccggcgcatggagggcggcgatcgaa
gacctcgagcttgcagtcctgcgcggcacacgcccgcctgccggcacggctggcctcttg
cgcgaattcaaccgttttcgtgaggagctggcaaagctgtggcgcagcgagacttccgcg
ctccacaaggccgagccccgtgcgcgtctcaaggccgaggatctcgatcgcatccaggca
ctgatcgatgtcttgcaaaaggcgctggcgccgatcgagagcctcgtatcgccaaagcca
ttcgacttcgccgagctcgcgcaccggcatcgcgagatcatgatcgagctgtcacgcgac
gagcagggctttccgctggccttcgaggaacgcgaaggcctcgcgctcgccggtgccttc
gacgatctcttgcgcggcggcacgaccagcggcttgatggtgacgctgcctgattatccc
gacgtcttccagaccgcgttcagcgaccgcgcggtacgacggcgcgacaaacctggtgcg
cggctgcagatctacggcccgctggagtcgcggctgatgcaggccgaccgcatcatcatc
ggcggactgatcgaaggcgtctggccgccggcgccgcgcatcgatccctggctgagccgg
ccgatgcggcacgagctcggcctcgatcttccggagcgccgcatcggcctttccgcgcac
gacttcgcccagttgctcggcggcggcgaggtgatcctcacccattccgccaaggccggc
ggcgcgccggcagtggcttcgcgcttcctgcatcggctggaggcggttgcgggcgatgat
cattggaaggcggccgttcgcgccggcgagaaatatgtgcagttcgcggccgcactggac
caaccggccgaggtcaggccggtcaagcagcccgagccgaggccgccgcgggcgacgcgg
ccgctcaggatgtcggtcaccgcaatcgaggactggctgcgcgatccctacacgatctac
gccaagcacatcttgcggctcgatgcgctcgatcccgtcgacatgccgctgtcggccgcc
gaccgcggctcggcgatccacgaagcgatcggcgagttcacgaaaaattatgcgacgcgc
ctgcccgacgatcccgcccgcgtgctgcgcgcgatcggcgagaggcactttgcgccgctg
atggagcggcccgaggcgcgcgcgttgtggtggccgcgcttccagcgcatcgcgcgctgg
ttcggcgaatgggagtcggcgcggcgcgatgcgctcggggccattgtcgcggagacgcgc
ggcgagatttcgatcaggctcgatcatgagcgcagcttccgcctctccgcgcgcgccgac
cgcatcgagcggcgtcaaggcggcggttacgccatccttgactacaagaccggccagccg
ccgaccggcaagcaagtccgcatgggcctgtcgccgcagctcacgctggaagccgcgatc
ctgcgcgagggcggctttcccgacatcgacgccggcgcgtccgtgagccagctcgtctat
gtgcgcctgagtggcaacaatccgccgggcgaggagcgcatcctcgagctcaagtacaag
cagggcgacgagccacagccgccggacacggccgcggccgaagcaagggccaagctggag
gcgctgatccgcgccttcgacgacgagaaccagccctacacctcgctgaacctgccgatg
tggaccaaccgctacggcacctatgacgatctcgcccggatcaaggaatggtccgcggcc
ggcggcctggggatcgaggaatggtga
DBGET
integrated database retrieval system
