Brachybacterium sp. SGAir0954: C1N80_00325
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Entry
C1N80_00325 CDS
T06008
Name
(GenBank) exonuclease V subunit beta
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
brr
Brachybacterium sp. SGAir0954
Brite
KEGG Orthology (KO) [BR:
brr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brr03400
]
C1N80_00325
Enzymes [BR:
brr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N80_00325
DNA repair and recombination proteins [BR:
brr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
C1N80_00325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QCR52178
UniProt:
A0A4P8TEG8
LinkDB
All DBs
Position
79284..82535
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AA seq
1083 aa
AA seq
DB search
MSTPGPSFTLINASAGSGKTHTLTHEIASRIEEGLDPSQLIATTFTKRAAAELRDRVRRT
LLERGQLDAARGIDSALISTVNAVSGELLREFALDAGISPDVQVLDEDRQRAAFRAAIDE
TAAQAGARASDLLARTEHDGEEDPELPFAASPSWRAHVRDLASRARTNLIDAQALRDGVE
ASWQDYREAALPTATPEDRRPAWTAQLDTALTDLRAQAAGDDKAAATVRKHLDTLEAMRR
DLRDPARAPWSRWAKLAAVGSGKAGDPGAKGYVYSKDVDLALLGTATMIDEELLANPVLQ
ADVRAVIALVMETAAESLEAYRDHKDALGLIDFVDQEVRTLALVRESPRAREAIRSRFRL
LAVDEFQDTSPVQLALFLALSELVEDKIWVGDPKQAIYGFRDADPALMTGIIAEIESGRT
DLGAATVRDLEHSWRSQAPVLDLVNAVFPQVFPDLPRHRVVMDAAPEAARRRAAAGRPPG
RLEAWLPEVPRKLTYPQHATAVADGVLDLLAEPGVSPGDVAVLVRSNQRAAEVAEALAAR
GVPASGEGAPILAAREGRLVRAALAVTLDLADTLALTELVDLLPDHAAHDGWFAELAAAP
DREGRRAVFARWWQDPVLAGLRDLREDCISLTPVEMITAVVDALDLPERIRSWSAPDQRL
RTLDALRAVAVQYADRARADSAPITLTGLRIALDAADAGPDLSSIPDTVWVGTIHGAKGL
EWSRVVVMLDHAPGDRSRHDGGFVVPAPQLQVTAPLDGRSPRYWPGVLPRYAQLQEGLSA
SEHGRRRARTEQEESGRLQYVALTRSADVTVLSGAGHAPVLDALVPGHEGAGPLLSWEAG
GETISVRGAGDLPATIRTPAGVLAEDAPTYRARRSTLAATDVPLRPEPGHRARAGARFQA
SGVASGTGTVHAPRSIGRRLVEGGGERWERVGEAVHAYLALPLAHLDAAQKQAAAGRLVE
RWAVARAISPDLLVEAGEAWAGFLAAEFPGARELTEQPISWWNEDSQVMEGWIDTLLELP
GGGIVLVDHKSYPGDDPVGHVERHYLGQLATYSRALAAAGAEPSRILLHLPLRGEVLEVD
VDA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgagcacccctggcccctccttcaccctgatcaacgcctcggcgggctccgggaagacc
cacacgctcacccacgagatcgcgagccggatcgaggaggggctggacccctcgcagctc
atcgcgacgaccttcacgaagcgcgccgcggcggagctgcgcgaccgtgtgcggcgcacg
ctgctcgagcgcggccagctcgacgccgcgcgcggcatcgacagcgccctcatcagcacc
gtcaacgcggtctccggggagctgctgcgcgagttcgccctcgacgccggcatctcgccc
gacgtgcaggtgctcgacgaggaccggcagcgggccgccttccgcgccgcgatcgacgag
accgccgcccaggccggggcccgggcgagcgacctgctcgcgcgcaccgagcacgacggg
gaggaggacccggagctgcccttcgccgcctccccctcgtggcgggcgcacgtgcgggac
ctcgcctcccgcgcccgcacgaacctcatcgacgcgcaggcgctgcgggacggcgtcgag
gcctcctggcaggactaccgggaggcggccctcccgacggccacgcccgaggaccgccgc
cccgcatggaccgcgcagctcgacaccgcgctgaccgacctgcgcgcgcaggcggccggc
gacgacaaggccgcggcgaccgtgcgcaagcacctcgacaccctcgaggcgatgcgccgg
gacctgcgggacccggcgcgggctccctggtcgcgctgggcgaagctcgccgccgtcggc
tccggcaaggccggggatcccggggcgaagggttacgtctacagcaaggacgtggacctc
gccctgctgggcacggcgacgatgatcgatgaggagctgctcgcgaaccccgtgctccag
gcggacgttcgggcggtgatcgccctggtcatggagaccgccgcggagtccctcgaggcg
taccgcgaccacaaggacgccctgggcctcatcgacttcgtggaccaggaggtgcgcacc
ctcgcgctcgtgcgtgagtccccgcgggcccgcgaggcgatccgctcgcggttccgtctg
ctcgcggtcgacgagttccaggacacgtcccccgtgcagctcgccctgttcctcgcgctg
agcgagctcgtcgaggacaagatctgggtgggcgaccccaagcaggcgatctacggcttc
cgcgacgcggaccctgccctcatgaccgggatcatcgcggagatcgagagcggccgcacg
gacctcggcgcggcgaccgtgcgggacctcgagcactcgtggcgctcgcaggcgcccgtg
ctggacctcgtgaacgccgtgttcccgcaggtcttcccggacctcccccggcatcgcgtg
gtcatggacgcggcgccggaggccgcgcgccgccgcgccgccgcgggccgccctccgggc
cggctcgaggcatggctgcccgaggtgccgcggaagctcacctacccccagcatgcgacg
gccgtggccgacggcgtgctcgacctgctcgccgagcccggcgtctcccccggcgacgtc
gccgtgctcgtgcgctcgaaccagcgcgccgccgaggtcgcggaggcgctcgcggcgcgc
ggcgtgcccgcctccggcgagggcgccccgatcctcgccgcgcgcgagggccgtctggtg
cgggcggcgctcgcggtgaccctcgacctcgccgacacgctcgccctcaccgagctcgtg
gaccttctcccggaccatgccgcgcacgacggatggttcgcggagctcgccgccgcaccg
gaccgcgaggggcggcgcgcggtgttcgcccgctggtggcaggacccggtgctcgcgggg
ctgcgcgacctgcgggaggactgcatctccctgacgccggtggagatgatcaccgccgtc
gtcgacgcgctcgacctgccggagcggatccggtcgtggtccgcgcccgatcaacggctg
cgcacgctcgacgcgctgcgcgccgtcgccgtgcagtacgcggaccgggcccgtgcggac
tccgccccgatcaccctcaccggcctgcggatcgcgctcgacgccgcggacgccggcccg
gacctctcgagcatcccggacaccgtgtgggtggggacgatccacggcgcgaagggcctc
gagtggtcgcgcgtggtggtcatgctcgaccatgcgccgggcgaccgctcccgccacgac
ggcggcttcgtcgtcccggcgccgcagctgcaggtcaccgccccgctcgacggccgctcc
ccgcgctactggccgggcgtgctgccccggtacgcgcagctgcaggaggggctctccgcc
tcggagcatggacggcgccgggcccggacggagcaggaggagtccgggcgcctgcagtac
gtggcgctcacgcgctcggccgacgtcaccgtgctgagcggcgccggccacgccccggtg
ctcgatgcgctggtccccgggcacgagggcgccggaccgctcctgagctgggaggcgggc
ggcgagacgatcagcgtgcgcggcgcgggcgacctgcccgcaacgatccgcacgccggcg
ggcgtgctcgccgaggatgcccccacctaccgggcacggcgcagcacgctcgcggcgacg
gacgtaccgctgcggccggagccgggacaccgggcccgggccggcgcccgcttccaggcc
tccggggtcgcctccggcacgggcaccgtccacgcgccccgcagcatcggccgccggctc
gtcgagggcggcggggagcgctgggagcgcgtgggcgaggcggtccacgcctacctcgcc
ctgcccctcgcccacctcgacgcggcgcagaagcaggccgcggcgggacggctcgtggag
cgctgggccgtggcccgggcgatctccccggaccttctcgtcgaggcgggagaggcgtgg
gcggggttcctcgcggcggagttcccgggcgcacgggagctgacggagcagccgatctcc
tggtggaacgaggactcgcaggtcatggaggggtggatcgacacgctgctcgagctgccg
ggcggcggcatcgtgctcgtggaccacaagtcctatccgggcgacgacccggtggggcac
gtggagcggcactacctggggcagttggcgacgtactcgcgggcgctcgcagcggccggg
gcggagccctcgcggatcctcctccatctgccgctgcgtggtgaggtgctcgaggtggac
gtcgatgcctga
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