Brachybacterium sp. SGAir0954: C1N80_00660 Help Entry C1N80_00660       CDS       T06008                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism brr  Brachybacterium sp. SGAir0954 Pathway brr03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:brr00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     C1N80_00660  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:brr03400]     C1N80_00660 Enzymes [BR:brr01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      C1N80_00660 DNA repair and recombination proteins [BR:brr03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      C1N80_00660 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol DNA_ligase_A_M LigD_N DNA_ligase_A_C DNA_primase_S Motif Other DBs NCBI-ProteinID:  QCR52237 UniProt:  A0A4V1FK50 LinkDB All DBs Position complement(157165..159678) Genome browser AA seq 837 aa AA seqDB search MATGEQKVEVDGRTLRVSHLEKVYYPSTGTTKGEVLDYYRRVAGVMIPQAARRPATRKRW VDGVGTAEHPGKAFFRKDLEDHAPDWVPRADIEHRDGTSTYPLVDEPAVLVWLAQLASLE IHTPQWRFDADLAPSGPDRLVLDLDPGEGAGLADCARVAGWCREILDGMGMASFPVTSGS KGIHLYAPLDGTAAAQEIAQVAHELARSLEEDHPDEVISDMKRSRRAGKVLVDWSQNNGH KTTVCPYSLRGRLRPTVAAPRSWEEIEDPELEQLELEEVLRRVEDGVDPISGLGLAGDGS HADEDRGTRDRLEVYRSKRDAARTPEPVPEHGPGTEAAQHALDAEEPMFVIQEHHASSLH WDVRLEHDGVLVSWAVPKGPPLDVDVNRLAVRTEDHPLEYGTFEGSIPKDEYGGGDVTIW DTGSVEIEKWREGKEIIAVCHGREDGGLGGVPRRYAFVHTGGMGGKRASRAAKEKARAHW LMHLMKDQPEAEPARAKSADPASDEGADAETMGEPISPMLATLGSREDIRDQDDWAFEMK WDGVRVIATVTAGAVRLTSRTGRDLTATFPELAELEDAIDPQVLTAGETVLDGEIVALDD RDRPSFPRLQRRLGLSRPRDVERARQDVEVHVMLFDLLVRGGDSLLRTPYRERRDALFDV VAPSGHVQLPHADHGDVDHAIALSKELQLEGVMAKRETSVYRPGKRSRTWIKIKNARHQE VVVIGWRHGKGGRAGGIGSLLLAVPDSDGELRYAGRVGTGFSDRDLEQIAATLSSRTRKT PPVDDVPSADRRDAEWVRADLVAEVQHTERTADGRLRHPVWRGWRQDKAANEVRWEE NT seq 2514 nt NT seq  +upstreamnt  +downstreamnt atggctaccggtgagcagaaggtcgaggtcgacggccgcacgctgagggtctcgcacctc gagaaggtctactacccctccacgggcaccaccaagggcgaggtgctggactactaccgg cgcgtcgccggggtgatgatcccgcaggccgcccgccgccccgccacccgcaagcgctgg gtcgacggcgtgggcaccgccgagcatcccgggaaggccttcttccgcaaggacctcgag gaccacgccccggactgggtgccgcgcgcggacatcgagcaccgggacggcacctcgacc taccccctggtcgacgagccggccgtgctcgtgtggctcgcccagctggcatccctcgag atccacaccccgcagtggcgcttcgacgcggacctcgcaccgtctggccccgaccggctc gtgctggacctcgacccgggcgagggtgcggggttggcggactgcgcccgtgtggccggc tggtgccgcgagatcctcgacggcatggggatggcgtccttcccggtcacctccggctcc aagggcatccacctctacgcacccctggacggcaccgccgcggcccaggagatcgcccag gtggcccacgagctggcccggtccctcgaggaggaccaccccgacgaggtcatcagcgac atgaagagatcgaggcgcgcgggcaaggtgctcgtggactggtcccagaacaacggccac aagaccaccgtgtgcccgtactcgctgcgggggcgcctgcggcccacggtcgccgcgccc cgcagctgggaggagatcgaggacccggagctcgagcagctggagctcgaggaggtcctg cggcgcgtcgaggacggcgtcgatccgatctccggcctgggactggccggcgacggctcg cacgccgacgaggatcgtggcacgcgggaccgcctggaggtctaccgctccaagcgcgac gccgctcggactcccgagcccgtccccgagcacgggccgggcaccgaggccgcgcagcac gcgctcgatgcggaggagccgatgttcgtgatccaggagcatcacgcctcgagcctgcac tgggacgtgcgcctcgagcacgacggcgtgctggtctcctgggccgtgcccaaggggccg ccgctggatgtggacgtgaaccgcctggccgtgcggacggaggaccatccgctcgagtac ggcaccttcgagggcagcatcccgaaggacgagtacggcggcggcgacgtcaccatctgg gacaccggctccgtcgagatcgagaaatggcgcgaggggaaggagatcatcgccgtctgc cacggccgtgaggacggcgggctcggcggggtgccgcgccgctacgcgttcgtacacacc ggcggcatgggcgggaagcgagcgagccgggcggcgaaggagaaggcccgcgcccactgg ctgatgcacctcatgaaggaccagcccgaagccgaacccgcccgcgccaagtccgccgat ccggcatccgacgagggggccgatgcggagacgatgggggagccgatctccccgatgctc gccaccctgggcagccgcgaggacatccgcgaccaggacgactgggccttcgagatgaag tgggacggcgtgcgcgtcatcgcgaccgtcacggccggcgccgtgcgcctcaccagccgc accggcagggacctgaccgccaccttccccgagctcgccgagctggaggacgcgatcgac ccgcaggtcctcacggccggcgagaccgtgctcgacggggagatcgtcgcgctcgacgac cgcgaccggccgtccttcccccgcctccagcggcggctgggactgagccgtccgcgggac gtcgagcgggcccgccaggacgtggaggtccatgtgatgctgttcgacctgctcgtgcgc ggcggggactcgctgctgcgcaccccgtaccgcgagcgccgggacgccctgttcgacgtg gtcgcgccgagcgggcacgtgcagctgccgcacgcggaccacggcgacgtcgaccatgcg atcgcgctctcgaaggagctgcagctcgaaggtgtcatggcgaagagggagacgagcgtg taccggcccggcaagcgcagccgcacctggatcaagatcaagaacgcccggcaccaggag gtggtcgtcatcggctggcggcacgggaagggcggccgcgcggggggcatcggctccctg ctgctggccgtccccgactcggacggcgagctgcgctacgccggacgcgtgggcaccgga ttcagcgatcgcgacctcgagcagatcgccgccacgctctcctcccgcacccggaagacg cccccggtcgatgacgtgccctccgcggaccgtcgcgacgccgagtgggtgcgcgcggac ctcgtggccgaggtccagcacaccgagcgcacggccgacggccgcctccgccaccccgtc tggcgcgggtggcggcaggacaaggcggcgaacgaggtgcgctgggaggagtga

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