Brachybacterium sp. SGAir0954: C1N80_04640
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Entry
C1N80_04640 CDS
T06008
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
brr
Brachybacterium sp. SGAir0954
Pathway
brr03030
DNA replication
brr03430
Mismatch repair
brr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C1N80_04640
03430 Mismatch repair
C1N80_04640
03440 Homologous recombination
C1N80_04640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brr03032
]
C1N80_04640
03400 DNA repair and recombination proteins [BR:
brr03400
]
C1N80_04640
Enzymes [BR:
brr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C1N80_04640
DNA replication proteins [BR:
brr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C1N80_04640
DNA repair and recombination proteins [BR:
brr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C1N80_04640
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_30
RuvB_N
AAA_14
AAA_18
AAA_16
Rad17
ResIII
zf-CXXC
DEAD
AAA_19
Mg_chelatase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QCR52937
LinkDB
All DBs
Position
1051339..1054872
Genome browser
AA seq
1177 aa
AA seq
DB search
MATALYRRYRPESFAEVIGQDHVTTPLRRALRNGRIGHAYLFSGPRGCGKTTSARILARC
LNCAEGPTDTPCGTCDSCRDLARGGAGSLDVVEIDAASHGGVDDARELRERASFAPVRDR
FKVFIIDEAHMVTSAGFNALLKLVEEPPEHVKFVFATTEPDKVIGTIRSRTHHYPFRLIP
PQVLTPYLEQVCAAEDVHVGDGVLPLVVRAGGGSARDTMSVLDQLMAGAGDDGLDHATAI
ALLGFTDTALLDQAITAISARDAASLYDAVEQVLATGHEPRRFVEDLLERVRDLIVLAAV
PERAEDLLPQVPADELASMREQAASIAPADLSRCGDLIHETLSTMSGATSPRLHLELLAA
RLVLRDERAAAAPAPGGQGGPAGQPGQGAPRGGQQANGRGQGAPAPQNGQGAPGADAAPT
AGSGREEARRIAQERAEASRRTRGSAAATRPDDRREATGTAAPQAPAPQQAPAAREEPAA
PQAPAAPQAPAQQQPAAAEQSAGQALAASTGSRPATTWDPTPAADHDRAPARGGAAPVEE
DPGQGAAQGAVAEESAAQAPAAQAPVEDAPSPAAPAGGPSTADVQGNWSAIMDELAQIRR
PSWALIAQNAQLNAMNGTNLVIGFRTDGLVAAFHRGTAAENLADAVRRIMHVEVTVQAVV
GDGPGGSGGPGPSGGPGGPGGQRGPGGQSGPSGQGGSGGQVGAGRQAGLDGQAGAGSNAG
YGGRGGAAAQGGNAGQSTSGGPQGTRAQSDPAGSARGGSRPWGDLAASAGSTSRGAAAPS
GRQRPAVDDHDLPPEPDDDEFPPDPEDSFPPDPQDQRSTAPSSAPRAAAPSASRGAAAAS
AASTPDASHSSGSGNGGGSSSRRWSDALPSAGGADAPTTGASAPGGSADEAPVVEDEGRD
SVPEGEPRTYGQAAIRRAIAEGRVVRSRPAAHIVAATTGAGDSTDVGASSTPAPGGPSGI
DPSAPSGPAPSAPSADDPFALSDPSASDPGAPSAGSALSSGSAPSPASASDADGPAGAMG
DAFSSGGPSEGAGTRVAAPLAPGASQAVRPATAWGDAAPAAAPSAPRPQSTTAPAAPAAG
FAPSAEQAVDDSAPRTGAALARHASQAARAAAADRRQQAQSRRPDEAPVPEAEVDPTGGA
SRDDEDAVVATRSGRQVIEAVLGGRVLEVIDETGDRR
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
gtggccaccgctctgtaccgtcgataccgcccggagtccttcgccgaggtgatcggccag
gaccacgtcaccacgcccctgcggcgcgcgctgcgcaacggccgcatcgggcatgcctac
ctcttctccgggccgcgcggctgtggcaagacgacctccgcgcgcatcctcgcgcgctgc
ctgaactgcgcggaaggacccacggacactccctgcgggacctgcgactcgtgccgcgac
ctcgcccgcggaggggccggcagcctcgacgtcgtcgagatcgacgccgcgagccacggc
ggtgtggacgacgcccgtgagctgcgcgagcgcgcctccttcgccccggtgcgcgaccgc
ttcaaggtgttcatcatcgacgaggcgcacatggtcacctccgcaggcttcaacgcgctg
ctcaagctcgtcgaggagccgcccgagcacgtgaagttcgtcttcgcgaccacggagccg
gacaaggtcatcggcaccatccgctcccgcacgcaccactacccgttccgcctgatcccg
ccgcaggtcctcaccccgtacctcgagcaggtgtgcgccgcggaggacgtgcacgtgggc
gacggcgtgctgccgctcgtggtccgggcgggcggcggctccgcgcgcgacacgatgagc
gtgctcgaccagctcatggccggcgccggggacgacggcctcgaccacgcgaccgcgatc
gcgctgctgggcttcacggacaccgcgctcctggaccaggcgatcaccgcgatctccgcg
cgggacgccgcgagcctgtacgacgcggtcgagcaggtgctcgccaccggccacgagccg
cgccgcttcgtcgaggacctcctggagcgggtgcgcgacctcatcgtgctcgccgcggtg
cccgagcgcgccgaggacctcctgccccaggtccccgcggacgagctcgcgtcgatgcgg
gagcaggccgcctcgatcgccccggcggatctctcccgctgcggcgacctcatccacgag
acgctctccacgatgagcggcgccacctccccgcggctgcacctcgagctgctcgccgcg
cgcctggtgctgcgggacgagcgggccgccgccgcaccggctccgggcggccagggcggc
ccggcggggcagcccggtcagggcgcaccccggggtggccagcaggcgaacgggcgcggt
cagggcgccccggcgccgcagaacggtcagggcgcgccgggcgccgacgccgcgccgacg
gccgggagcggccgggaggaggcgcgtcgtatcgcgcaggagcgcgcggaggcctcgcgt
cgcacgcgcggcagcgccgcggcgaccaggcccgacgatcggcgggaggccaccggcacc
gcggcgccgcaggcacccgcgccccagcaggcacccgccgcgcgggaggagcctgccgcg
ccgcaggcgcctgccgcgccgcaggcgcccgcgcagcagcagcctgccgcggcggagcag
tcggcgggccaggccctcgcggcgtcgaccggcagccgccccgccacgacctgggacccg
acgccggcggcggaccatgaccgggctcccgccaggggcggcgccgcacccgtcgaggag
gatcccggccagggcgcggcccagggggctgtcgccgaggagtccgcggcacaggccccg
gcggcgcaggcacccgtggaggatgctccgtcgcctgcggccccagcgggcggcccgtcg
acggccgacgtgcagggcaactggtccgcgatcatggacgagctcgcccagatccgccgt
cccagctgggcgctgatcgcgcagaacgcccagctcaacgccatgaacgggacgaacctg
gtgatcgggttccgcaccgacgggctcgtggcggccttccatcgcggcaccgcggcggag
aacctcgccgacgccgtgcgccgcatcatgcacgtcgaggtcaccgtccaggctgtcgtg
ggagacgggcccggcggttccggcgggcccggtccctccggcggtccgggtgggcccggc
ggtcagcgcggccccggcggtcagagcggccccagcgggcagggcgggtccggaggccag
gtgggcgccggtcgccaggcgggcctcgatggtcaggcaggcgccggcagcaacgccgga
tacggcggccggggcggtgccgctgctcagggcgggaacgccgggcagtcgacctccggc
gggccgcagggcacccgtgcgcagagtgatcccgccggctccgcccggggcgggagccga
ccgtggggcgacctcgccgcctccgccgggtcgacctcgcgcggggccgccgcgccgtcc
gggcgacagcgtcccgccgtcgacgaccacgacctcccgccggagcccgacgacgacgaa
ttcccgccggacccggaggactcgttcccgccggatcctcaggaccagcggtccactgcc
ccgtcgtcggcgccccgggccgccgcgccgtccgcgagccgcggcgccgctgcggcgtcc
gccgcgtccacgcccgacgcctcgcacagcagcggcagcggcaacggcggcgggagctcc
tcccgtcgctggtccgatgccctgccctccgcgggaggagccgacgcaccgaccaccggg
gcgagcgcgcccggtggcagcgccgatgaggccccggtcgtcgaggacgagggtcgggac
agcgtgcccgagggcgagccccgcacctacggtcaggccgcgatccggcgcgccatcgcc
gagggccgcgtggtgcgctcccgcccggccgcgcacatcgtcgccgccacgaccggtgcc
ggcgactcgaccgacgtcggcgcctcgtcgacgcccgccccgggcggcccatcgggcatc
gacccgtccgccccgtcaggtcccgcgccgtccgccccgtcggcggacgaccctttcgcc
ctgtcggacccgtcggcctccgacccgggtgccccgtccgccggttctgccctctcgtcg
ggctccgcgccgtcgcccgcatcggcctccgacgcggacggccctgccggggcgatgggc
gacgcgttctcgtcgggcgggccgtccgagggtgcagggacccgggtcgcggcaccgctc
gcacccggcgcctcgcaggccgtccgcccggccaccgcctggggtgacgccgctcccgca
gccgccccgtcggccccgcgcccgcagtcgaccaccgctcccgccgctcctgcagcagga
ttcgcgccgtccgccgagcaggcggtcgacgactccgccccgcgcaccggcgcggccctc
gcccggcatgcctcgcaggcggcgcgcgccgcggccgccgaccgtcgccagcaggcacag
agccgcaggcccgacgaggcccccgtgccggaggccgaggtcgaccccaccggcggcgcc
tcccgtgacgacgaggacgccgtggtcgcgacccgctcgggccgccaggtcatcgaggcc
gtgctcggcggccgggtcctcgaggtcatcgacgagaccggcgaccggcgctga
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