Brachybacterium sp. SGAir0954: C1N80_05080
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Entry
C1N80_05080 CDS
T06008
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
brr
Brachybacterium sp. SGAir0954
Brite
KEGG Orthology (KO) [BR:
brr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brr03400
]
C1N80_05080
DNA repair and recombination proteins [BR:
brr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C1N80_05080
Archaeal homologous recombinant proteins
C1N80_05080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
ABC_tran
AAA_21
nSTAND3
DUF5906
Motif
Other DBs
NCBI-ProteinID:
QCR53016
UniProt:
A0A4P8TGN0
LinkDB
All DBs
Position
1167808..1170936
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AA seq
1042 aa
AA seq
DB search
MKLHHLRLTAIGPFAGTVDVDFAALGASGMFLLEGPTGSGKSTILDAIVYALYGQVAGSA
TSTDRIRSQFAGPTEPSVVDLVFETGAGIFRVRRSPEFQRTKQRGTGTTKEQAKAVLWRI
GSPELIPAVVEDSAGAGAGLEAVATRMDEVGREIQRAVGLSREQFTQTVLLPQNEFARFL
RAGTAERQQVLQRVFGTELYEQVEKRLAEMRVDANKQVTAARETLGRALARFVEATGVEG
EQEAALTGQAQALRPEALAEGADAALAGVTTRAQEATARAAATQQAEQAARTAAEAAALA
ARRIDRRRELRTLAARLEEQKPAVDGARTALSRDEAARPVVGALGRREEARARAAAAIEA
LADLAARTGEERPDLLALLPDGADRADGAAGTDGTAGGSRAAEADAALAAAVQESTTAAG
ALADLVALETGLAAREKALDEERERIAASRTALASATALLEARPAAREELVTARDEARTR
AAGLADARLAQAAATEQATASRAAQQQAAAVETALETQKKALATASSAAEAESALRRRRY
AGIAAELAVALEDGDPCPVCGALEHPHRADPAKDAVSPEQVEAAEAARVEAEAARSRAEQ
AHALAEEKLARLREAAGELEPDAARAALEAATTRVQAAQEAQETASRLEQRITAHDAETE
QLTRRGQADALALSRAETALEAAATAIGTDRERIVEARGEDGSVGHRRRAHLARAAAATT
LRDALRARTEAEERAREAEEESTRALAAAAIATDEQARAAVLEPAERRRLATLLEARAVD
EARLADGLAEEGVGDAPTTDAALEEARAAVTATAQALTVAQAAAREDGAAAARLEAVAER
GRTARTALDRAIDEVRSVSERAGVIVRVADLATGRSADGERVQLSTYVLKWRLDAVVEAA
NARLALFSGSELELLRDTGARGARKTGLDLLVMDRRTDQVRVPETLSGGETFFVSLALAL
GLADIVMGEAGGVQMETLFIDEGFGSLDPETLETVVREIGRLAEGGRTIGIVSHVGDMKA
QVAEQIHVRRGEGSRSTLTITA
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctccaccacctgcgcctcaccgcgatcggccccttcgccggcaccgtcgacgtc
gacttcgccgccctcggcgcgagcggcatgttcctgctcgaggggcccaccggctccggc
aagtccacgatcctcgacgcgatcgtctacgccctctacggccaggtcgccggcagcgcc
acgagcaccgaccgcatccgctcccagttcgccggccccaccgagccgagcgtcgtggac
ctcgtgttcgagaccggcgccgggatcttccgggtgcgccgcagccccgagttccagcgc
accaagcagcgtgggacgggcaccaccaaggagcaggccaaggccgtgctctggcggatc
ggctcgcccgagctcatccccgccgtggtcgaggactccgccggcgccggcgcgggcctc
gaggccgtcgcgacccgcatggacgaggtgggacgcgagatccagcgcgccgtgggcctc
agccgcgagcagttcacgcagacggtcctgctgccccagaacgagttcgcccgcttcctg
cgcgcgggcacggccgagcgtcagcaggtgctgcagcgggtcttcggcaccgagctgtac
gagcaggtcgagaagcgcctcgccgagatgcgtgtcgatgcgaacaagcaggtcaccgcc
gcgagggagacgctcggccgggcgctcgcccgcttcgtcgaggcgaccggcgtcgagggg
gagcaggaggcggccctcaccgggcaggcgcaggccctgcgcccggaggcgctcgccgag
ggggccgacgccgccctcgccggcgtcacgacgcgcgcgcaggaggccacggcccgcgcg
gccgcgacgcagcaggcggagcaggcggcgcgcaccgccgccgaggccgccgccctcgcc
gcccgccgcatcgaccgccgccgcgagctgcggacgctcgcggcgcggctcgaggagcag
aagcctgccgtcgacggcgcacgcaccgccctgtcccgtgacgaggcggcccggccggtc
gtcggcgcgctcgggcgccgcgaggaggcccgcgcccgcgccgctgccgcgatcgaggcg
ctcgccgacctcgccgcccgcaccggcgaggagcgccccgacctgctcgcgctgctgccc
gacggggccgacagggccgacggcgccgccgggaccgacgggacggccggcggctcccgg
gccgcggaggcggacgccgccctcgccgccgccgtccaggagtcgaccaccgcggccggc
gccctcgccgatctcgtcgccctcgagacggggctcgccgcccgggagaaggccctcgac
gaggagcgcgagcggatcgccgcctcgcgcaccgccctggcctcggccaccgctctgctc
gaggcgcggcccgccgcccgggaggagctcgtcaccgcgcgggacgaggcccgcacccgc
gccgccggcctcgccgatgcgcggctcgcgcaggccgccgcgacggagcaggcgaccgca
tcccgcgccgcgcagcagcaggccgccgccgtcgagaccgctctggagactcagaagaag
gcactggccacggcctcctccgccgccgaggcggagtccgcgctgcgtcgccgtcgctac
gccgggatcgccgccgagctcgccgtcgccctcgaggacggggacccgtgccccgtgtgc
ggcgctctcgagcacccccaccgcgcggacccggcgaaggacgccgtgagccccgagcag
gtcgaggccgcggaggccgcccgggtcgaggcggaggccgcacgctcccgcgccgagcag
gcccacgccctcgccgaggagaagctcgcgcgcctgcgcgaggccgccggtgagctcgag
cccgacgccgcccgcgccgccctcgaggccgcgaccacccgggtgcaggccgcgcaggag
gcgcaggagacggcctcccggctcgagcagcggatcaccgcccacgatgccgagaccgag
cagctcacccggcgcggccaggcggacgccctcgccctctcccgcgcggagacggccctc
gaggccgccgcgaccgcgatcgggacggaccgggagcggatcgtcgaggcccgcggggag
gacggcagcgtcggccaccggcgccgcgcgcacctcgcccgcgccgccgccgcgaccacg
ctgcgcgacgccctgcgcgcccgcaccgaggccgaggagcgggcccgcgaggcggaggag
gaatccacccgtgccctcgccgccgccgcgatcgccacggacgagcaggcccgcgccgcc
gtgctcgagcccgccgagcgcaggcgcctcgcgacgctcctcgaggcccgggccgtggac
gaggcccgcctcgccgacggcctggccgaggagggcgtcggcgacgccccgacgaccgac
gccgccctcgaggaggcacgggccgcggtcaccgcgaccgcgcaggccctcaccgtcgcc
caggctgccgcccgggaggacggcgccgccgcggcgcgcctcgaggcggtcgccgagcgc
ggccgcaccgcccgcaccgccctcgaccgggcgatcgacgaggtgcgcagcgtgagcgag
cgcgccggcgtgatcgtgcgcgtcgccgacctcgcgaccggccgctctgccgacggggag
cgcgtgcagctgtccacctacgtgctcaagtggcggctcgacgccgtggtcgaggcggcc
aacgcgcgcctggccctgttctccgggtcggagctcgagctgctgcgcgacaccggcgcc
cgcggcgcccggaagacgggactggacctgctggtcatggaccgccgcaccgatcaggtg
cgcgtgcccgagaccctctccggcggcgagaccttcttcgtctctctcgcactcgccctg
ggcctcgcggacatcgtcatgggggaggcgggcggcgtgcagatggagaccctcttcatc
gacgagggcttcggctccctggaccccgagacgctcgagaccgtggtccgcgagatcggg
cgcctcgcggagggcggccgcaccatcgggatcgtcagccacgtcggcgacatgaaggcg
caggtcgccgagcagatccacgtgcgccgcggggagggcagccgatccacgctcacgatc
accgcctga
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