Brachybacterium sp. SGAir0954: C1N80_10950
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Entry
C1N80_10950 CDS
T06008
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
brr
Brachybacterium sp. SGAir0954
Brite
KEGG Orthology (KO) [BR:
brr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brr03019
]
C1N80_10950
Enzymes [BR:
brr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
C1N80_10950
Messenger RNA biogenesis [BR:
brr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C1N80_10950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QCR54043
UniProt:
A0A4P8TJK4
LinkDB
All DBs
Position
2424574..2427516
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AA seq
980 aa
AA seq
DB search
MTSPSEQYAAWAAQRRLDASELGRFTGRFPFALDPFQLEGCRELESGRSVLVAAPTGAGK
TVVGEFAVHLALAQGRKVFYTAPIKALSNQKHGELAEWLGAERVGLLTGDTSVRPDAEVV
VMTTEVLRNMLYADSPLLEGLGFVVMDEVHYLADRLRGPVWEEVIIHLDRAVQLVALSAT
VSNAEEFGAWLQEVRGDTGIVVSETRPVPLWQHVVVGDELLDLFVDDAGAPVVSHGPGAR
SDRLVNPQIQQIASVSLPADGGGRGYAGRRRTSGRHRPRGSGQRHGGGRGRGAGRGGHGG
HRGSEHRGGDHRGGDRDRDSREGRDPRDHRGSLPRPARRTEVISMLDDAALLPAIVFIFS
RAGCEAAVRQCAQGRLRLTSEDERLRIRRVLDERLSTIGIEDEEVLGIHAFRRAALDGYA
AHHAGILPLLKTVVEELFAAGLVKVVFATETLALGINMPARSVVLEKLVKFNGVEHADLT
PGEYTQLTGRAGRRGIDTEGHAVVLAGPHFDAAGVAALASRRTYPLRSAFRPTANMAVNL
LERFDLSRARETLETSFAQFQADRSVVGLARRARELEDTAASYREALDCDRGDLLGYAAL
RDRIADREKVLSRHRAERDRDRTAGILKGLRRGEILALPGGKRRGYAVVLDVDTAVLGGP
QVQLLDTEGRRRTIRPSDLPSSPAVIDAMKLPRAETLSAAKVRRDTAAALRQHLAGHDDA
RADVRRRAGRVPSTAATDTTLLALKAELAEHPCAQCPDLEAHLRWVHRYESTRKELASVH
RRIEGRTSSLARELDRLTALLEELGYLEGQHGQLVPTERGLRLRRIFSDRDLMIAECIEH
GAWTGLDAAGLAAVVSAAVHESRRDDGGAPEIIIDAAVDAALEATARTAQQLQAAQTRHG
IDATPPPDPAVAATVHRWARGVHLAGALEGTGMPAGDFVRHCRQVIDLLDQLTVDEQLGA
VARSAILAVRRGLVAQEIDR
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgacctccccgtccgagcagtacgcggcctgggccgcgcagcgacgtctcgacgcctcc
gagctcgggaggttcaccggccgcttccccttcgcgctggacccgttccagctcgagggc
tgccgggagctcgagtccggccgctccgttctcgtcgccgcgccgacgggcgccggcaag
acggtcgtgggggagttcgccgtgcacctcgcgctcgcccagggccgcaaggtcttctac
acggcgcccatcaaggcgctctccaaccagaagcacggcgagctggccgaatggctcggc
gcggagcgcgtgggactgctgacgggggacacctccgtgcggccggacgccgaggtggtc
gtcatgaccaccgaggtgctgcgcaacatgctctacgcggactccccgctgctcgagggc
ctcggcttcgttgtcatggacgaggtgcactacctcgccgaccgcctccgcgggccggtc
tgggaggaggtcatcatccacctcgaccgcgccgtgcagctcgtggcgctctccgcgacg
gtctccaacgcggaggagttcggcgcctggctgcaggaggtccgcggcgacaccgggatc
gtggtctccgagacgcggcccgtgccgctgtggcagcacgtcgtcgtcggcgacgagctc
ctggacctcttcgtcgacgacgcgggggccccggtcgtctcccacggtccgggggcgcgc
agcgatcggctcgtgaacccgcagatccagcagatcgcctccgtctccctcccggccgac
ggcggcggacgcggctacgcgggccgtcgccgcacgagcggtcgccatcgcccgcgcggc
agcggacagcggcacggcggcggccggggtcgcggtgccggccggggcggtcacggcggc
caccgggggagcgagcatcgcggcggtgaccaccgcggcggcgatcgcgacagggacagc
agggagggcagggaccctcgcgaccatcgcgggagtctgccgcgccccgcgcgccgcacc
gaggtcatctcgatgctcgacgacgccgccctgctccccgcgatcgtcttcatcttctcc
cgcgccggctgcgaggccgccgtgcggcagtgcgcccagggacggcttcgcctgacgagc
gaggacgaacggctgcggatccgccgcgtgctcgacgagcgactctccacgatcgggatc
gaggacgaggaggtgctgggcatccatgccttccgtcgtgcggccctcgacggctacgcc
gcccaccacgccgggatcctcccgctcctgaagaccgtcgtcgaggagctcttcgccgcc
ggtctcgtgaaggtggtcttcgcgacggagaccctcgcgctgggcatcaacatgcccgcc
cgctccgtggtgctcgagaagctcgtgaagttcaacggcgtcgagcacgcggatctcacc
ccgggggagtacacccagctgacggggcgcgcgggccgccgcggcatcgacaccgagggc
catgcggtcgttctcgccgggccgcacttcgacgccgccggggtcgccgccctcgcctcc
cggcgcacctacccgctgcgctcggccttccggcccaccgcgaacatggccgtgaacctg
ctcgagcgcttcgacctctcccgcgcccgggagaccctcgagacgagcttcgcgcagttc
caggcggaccgctccgtcgtgggtctcgcccggcgcgcccgcgagctcgaggacaccgcc
gcctcctaccgcgaggcgctcgactgcgaccgcggcgacctgctcggctatgccgcgctg
cgcgaccgcatcgcggaccgcgagaaggtgctctcccgccaccgcgccgagcgggaccgc
gaccggaccgcgggcatcctgaagggcctgcgccgcggcgagatcctcgcgctgcccggc
gggaagcggcgcggctacgcggtcgtgctcgacgtggacaccgccgtgctcggcgggccc
caggtgcagctgctcgacaccgagggccgccgtcgcacgatccgcccgtcggacctcccc
tcctccccggccgtcatcgacgcgatgaagctgccgcgggcggagaccctctccgcggcg
aaggtgcggcgggacaccgccgccgcgctgcgccagcacctcgccggccacgacgacgcc
cgggcggacgtgcgccggcgggccggccgggtgccgtcgaccgccgcgacggatacgacg
ctgctcgcgctgaaggcggagctcgccgagcacccgtgcgcgcagtgcccggatctcgag
gcgcacctgcgctgggtgcaccgctacgagagcacccgcaaggagctcgcctccgtgcac
cgccgcatcgagggccgcacgagctccctcgcccgcgagctcgaccgcctcacggcgctg
ctcgaggagctcggctacctcgaggggcagcacggacagctcgtccccacggagcgcggg
ctgcgcctgcgccggatcttctccgaccgcgacctcatgatcgccgagtgcatcgagcac
ggcgcctggaccgggctggacgccgccggtctcgcggccgtggtctccgcggcggtgcac
gagtcacggcgggacgacggcggtgccccggagatcatcatcgacgccgccgtggacgcc
gcgctcgaggccacggcgcggacggcgcagcagctgcaggccgcgcagacgcgccacggc
atcgacgcgacgccgccgccggacccggccgtcgccgcgaccgtgcaccgctgggcgcgc
ggcgtgcacctcgccggggccctcgagggcaccggcatgccggcgggcgacttcgtgcgg
cactgccgccaggtgatcgacctgctcgaccagctcaccgtcgacgagcagctcggcgcc
gtggcgcgctccgcgatcctcgccgtgcgccggggactcgtcgcccaggagatcgatcga
tga
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