Brachybacterium sp. SGAir0954: C1N80_11905
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Entry
C1N80_11905 CDS
T06008
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
brr
Brachybacterium sp. SGAir0954
Pathway
brr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1N80_11905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brr03019
]
C1N80_11905
03009 Ribosome biogenesis [BR:
brr03009
]
C1N80_11905
Enzymes [BR:
brr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C1N80_11905
Messenger RNA biogenesis [BR:
brr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1N80_11905
Ribosome biogenesis [BR:
brr03009
]
Prokaryotic type
rRNA helicases
C1N80_11905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
FKRP_N
Motif
Other DBs
NCBI-ProteinID:
QCR54213
UniProt:
A0A4P8TJZ6
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All DBs
Position
2644286..2646235
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AA seq
649 aa
AA seq
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MTDVSPAPDHEGAAASSVPAEPGTDEQSAAQPSAEAPAPRSEGPTFEDLDLPPALRRAVA
DLGFERPSPIQAKAIPVLLQGRDVIGVAQTGTGKTAAFGLPLLAAVDPSLREVQAFVLTP
TRELAMQVADAITSFASSIGGLEVVAVYGGSPYPPQERALARGAQVVVGTPGRVMDHMRR
SSLRLDTVRFAVLDEADEMLRMGFAEDVEEILSKAPASRQVALFSATMPPAIRKVAADHM
TDPERISITPQSSTVSSVHQTFAVVPFRHRTGALSRVLATSDAEAAIVFVRTRAAAEEVG
TELVARGHIAATISGDVPQKDREKIVERLRDGSLKILVATDVAARGLDVEKIGLVVNFDV
PREPEAYVHRIGRTGRAGRSGEALTFIGGHERRTLRTIEKATKQTLEEAVIPSPRDVSKH
RLATLLKEVPARQERGRLELYRELIGEFVESQGIDPLELAAVLGAMTVGDAGPGAPNEDE
EFTQQTGRHDRDDRRDDRHGDRRDDRSGGSRTEHGYTQYRIGVGHTHGAKPPSILGTITG
EGGLNGKDVGKISIFGNFALVQIKGSLSPKQIDDISRARIAGRELRISEDTGPRGGGGRG
GRDDRPRRRFDDDRPRHRDGDRGGYRGGARREGSSRYDAKRSGGRRHDG
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgtctcccctgcccctgatcacgagggcgccgccgcctcctccgtccccgcc
gagcccggcacggacgagcagagcgccgcgcagccctcggcagaggcaccggccccgcgc
agcgagggccccaccttcgaggacctcgacctgccgccggcgctccgccgcgcggtcgcc
gacctcggcttcgagcgcccctcccccatccaggccaaggccatccccgtgctgctccag
ggtcgcgacgtcatcggcgtcgcccagaccggcaccggcaagaccgccgccttcggcctc
ccgctgctcgccgcggtggatccgtccctccgcgaggtccaggccttcgtgctcaccccg
acccgcgagctggccatgcaggtggccgatgccatcacctcgttcgcctcttcgatcggc
ggcctcgaggtcgtcgccgtctacggcggctccccctacccgccccaggagcgcgcgctg
gcccgcggcgcccaggtcgtcgtcggcacccccggccgcgtcatggaccacatgcgccgc
tcgagcctgcgactggacacggtgcgcttcgccgtcctcgacgaggccgacgagatgctc
cgcatgggcttcgcggaggacgtcgaggagatcctgtcgaaggctcccgcctcccgccag
gtggcgctgttctccgccaccatgccgcccgcgatccgcaaggtcgcggccgatcacatg
accgaccccgagcggatcagcatcaccccgcagtcctcgacggtctcgagcgtccaccag
accttcgccgtcgtccccttccgtcaccgcaccggagcgctctcccgcgtgctcgcgacc
tccgacgccgaggccgcgatcgtcttcgtgcgcacccgcgccgccgccgaggaggtgggc
accgagctcgtggcccgcggtcacatcgcggcgaccatctccggcgacgtgccgcagaag
gaccgcgagaagatcgtggagcgcctgcgcgacggctccctgaagatcctcgtcgcgacc
gacgtcgccgcccgcggcctcgacgtcgagaagatcgggctcgtcgtgaacttcgacgtg
ccccgcgagcccgaggcctacgtgcaccgcatcggccgcaccggccgcgcgggccgctcc
ggtgaggcgctgaccttcatcggcgggcacgagcgccgcacgctgcgcaccatcgagaag
gccaccaagcagacgctcgaggaggccgtgatcccgtccccgcgggacgtctcgaagcat
cgcctggccaccctcctcaaggaggtccccgcccgccaggagcgcggacgcctcgagctg
taccgcgagctgatcggcgagttcgtcgagagccagggcatcgacccgctcgagctggcc
gccgtgctgggagcgatgaccgtcggcgacgccggcccgggcgcgccgaacgaggacgag
gagttcacccagcagaccggtcgccacgaccgcgacgaccgtcgggacgaccgtcacggc
gaccgtcgggacgatcgctccggcggatcgcgcaccgagcacggctacacccagtaccgc
atcggcgtgggccacacccacggggcgaagccgccgtcgatcctcggcacgatcaccggt
gagggcggcctgaacggcaaggacgtcggcaagatctcgatcttcggcaacttcgcgctc
gtccagatcaagggcagcctctccccgaagcagatcgacgacatcagccgtgcgcgcatc
gccggccgcgagcttcgcatcagcgaggacaccggcccccgcggcggcggcggccgcggc
gggcgcgacgatcgtccccgtcgtcgcttcgacgacgaccgcccgcgccaccgcgacggc
gatcgtgggggctaccgcggcggcgcccgtcgcgagggctcctcgcgctacgacgcgaag
cggagcggcggtcgccggcacgacggctga
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