Brachybacterium sp. SGAir0954: C1N80_13130
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Entry
C1N80_13130 CDS
T06008
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brr
Brachybacterium sp. SGAir0954
Pathway
brr03420
Nucleotide excision repair
brr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1N80_13130
03430 Mismatch repair
C1N80_13130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brr03400
]
C1N80_13130
Enzymes [BR:
brr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N80_13130
DNA repair and recombination proteins [BR:
brr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N80_13130
MMR (mismatch excision repair)
Other MMR factors
C1N80_13130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
PrkA
Motif
Other DBs
NCBI-ProteinID:
QCR54421
UniProt:
A0A4P8TKH2
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All DBs
Position
complement(2910464..2912554)
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AA seq
696 aa
AA seq
DB search
MDETTPPTAEQLLEALDPEQREVATSFGAPLCVLAGAGTGKTRAITHRIAHGVATGRMDP
KHVLAVTFTAKAAAEMRSRLRDLGVPAVQARTFHSAALRQLRHFWPRVVGGPMPELMPQK
YAGIGEACQRLHMSVDRAALRDIVAEVEWSRVSMLTPESYPAAAEAAQRPGVAGFDSRSI
SRILTQYEEVKKERGVLDFEDVLLHMVGFLTERADVAREVRSQYRHLVVDEYQDVSTLQH
ALLRLWLGSSDDLCVVGDAAQTIYTFAGARASFLLDFGKEFPRARTIRLERNYRSTPQIV
RVANTVLDGARGRTRASRLTLVAQRPAGPPPVVEHFADDDAEAQGTAARIAELIEEGRSA
SDMAVLFRTNSQSEALEQALTARGIGYLVRGGDRFFDRQEVRRAMVTLRAATRVEQLEPD
RAVRDVLTQLGWSPNPPEGTGALRERWDSLQALVGLADTVLARPGAGLPEVVRELEERAE
AQSAPVVDGVTLASVHAAKGLEWPVVHLVGASDGLLPISMARTAMEIEEERRLFYVALTR
ARDLLTISWAAARTPGARGSRKPSRFLDGIIAAPAEPAGGGGATARRTGRRGATVYSECT
VCGEALVSAREQRVGRHGGCPAGAGEKVRDALRTWRAQRAREQGSPPFAVLTDAALEAIA
ERNPRTARELLAVPGLGATAIQRHGEAILAVLDDMR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaccacccctcccaccgccgagcagctcctggaggcgctggaccccgagcag
cgagaggtcgccacgagcttcggcgcgccgctgtgcgtgctcgccggcgccggcacgggc
aagacccgtgcgatcacgcaccgcatcgcccacggcgtcgcgaccggccgcatggacccc
aagcacgtgctcgccgtgaccttcaccgcgaaggccgccgcggagatgcgctcgcggctg
cgcgacctcggcgtccccgccgtgcaggcccgcaccttccactcggcggcgctgcgccag
ctgcgccacttctggccgcgcgtggtgggcggccccatgccggagctcatgccgcagaag
tacgcgggcatcggcgaggcctgccagcgcctgcacatgagcgtggaccgcgcggcgctg
cgcgacatcgtcgccgaggtcgagtggtcccgcgtgtcgatgctgacccccgagtcctac
ccggccgccgcggaggccgcccagcggcccggggtcgccggcttcgactcccgctcgatc
tcccgcatcctcacccagtacgaggaggtgaagaaggagcgcggcgtgctcgacttcgag
gacgtcctgctgcacatggtcggcttcctcaccgagcgggccgacgtcgcccgcgaggtg
cgctcccagtaccgccatctcgtcgtcgacgagtaccaggacgtctcgacgctccagcac
gcgctgctgcggctgtggctcggcagctccgacgacctctgcgtggtgggcgacgccgcg
cagacgatctacacgttcgccggggcgcgcgcctcgttcctgctggacttcggcaaggag
ttcccgcgcgcccgcaccatccgcctcgagcgcaactaccgctcgaccccgcagatcgtg
cgggtcgcgaacacggtgctcgacggggcgcgcggccgcacccgcgcctcccggctgacc
ctcgtcgcgcagcggcccgccggccccccgccggtggtcgagcacttcgcggacgacgac
gccgaggcgcagggcacggcggcacgcatcgcggagctgatcgaggaggggcgcagcgcc
tccgacatggcggtgctcttccgcaccaacagccagtccgaggccctcgagcaggcgctc
accgcgcgcggcatcggctacctcgtgcgcggcggcgaccggttcttcgaccggcaggag
gtgcggcgcgcgatggtcaccctgcgggccgcgacccgcgtcgagcagctcgagccggat
cgcgcggtgcgggacgtgctcacccagctgggctggtccccgaacccgcccgaggggacg
ggggcgctccgcgagcgctgggactccctgcaggcgctcgtcggcctcgcggacaccgtc
ctcgcccggcccggcgccgggctgcccgaggtggtccgggagctcgaggagcgggccgag
gcgcagtccgcgccggtggtcgacggcgtcaccctcgcctccgtgcacgcggcgaagggc
ctggagtggccggtcgtgcacctggtcggggcgagcgacggcctgctgccgatctccatg
gcccgcacggcgatggagatcgaggaggagcgacggctcttctacgtggcgctcacccgc
gcccgcgacctcctgacgatcagctgggccgccgcgcgcacgccgggggcccgcgggtcc
cgcaagccctcacgcttcctcgacggcatcatcgccgcccccgcggagccagcgggcggg
ggaggggcgaccgcgcgccgcacggggcgccgcggcgcgaccgtgtacagcgagtgcacg
gtgtgcggcgaggcgctggtctccgcacgcgagcagcgggtgggccgccacggcggctgc
cccgccggcgcgggggagaaggtgcgcgacgcgctccgcacgtggcgcgcgcagcgggca
cgggagcagggcagcccgcccttcgcggtgctcaccgacgccgcgctcgaggcgatcgcc
gagcggaacccccgcaccgcccgtgagctgctggccgtgccggggctcggggcgacggcg
atccagcgccacggggaggccatcctggccgtcctcgatgacatgcgctga
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