Brachybacterium sp. SGAir0954: C1N80_14415
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Entry
C1N80_14415 CDS
T06008
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brr
Brachybacterium sp. SGAir0954
Pathway
brr03420
Nucleotide excision repair
brr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1N80_14415
03430 Mismatch repair
C1N80_14415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brr03400
]
C1N80_14415
Enzymes [BR:
brr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1N80_14415
DNA repair and recombination proteins [BR:
brr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1N80_14415
MMR (mismatch excision repair)
Other MMR factors
C1N80_14415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
AAA_22
ADDB_N
ResIII
DUF4853
Motif
Other DBs
NCBI-ProteinID:
QCR54654
LinkDB
All DBs
Position
complement(3193976..3196750)
Genome browser
AA seq
924 aa
AA seq
DB search
MSSLFDDLSLPDSFRTLEGVRADPAAPARRDDLEADVPPEEAPVEDAPPEEDGPEEEDPF
AGDAPWTPAPPALQQAVARVPAPRRQVDPAALAVLVEDLNGPQREAVEHRGGPLLIVAGA
GSGKTRVLTRRIAHLLRSGEALPGEILAITFTNKAAAEMRERVAELVGPASAGMWVSTFH
SACVRILRRDAQAAGLKSSFTIYDSADSLRLITTISKDLELDTKKNAPRAIAARISALKN
ELVDPIDFADQAETAKNPFEKTLARIYTNYTERLRQANAVDFDDLIGLTVQMLRENPAIR
EGYRRRFRHLMVDEYQDTNPAQYALVQELVGEDPRADLTVVGDSDQSIYAFRGATIRNIV
EFEQDFPSARTIVLEQNYRSTQNILSAANTLIAGNEGRRRKNLWTDHGSGEKITLYVADD
EASEARYIGRQIDALVDAGRRAGDVAIFYRANAQSRALEDQLIRVGLPYKVVGGTRFYER
REIKDALAYLQVLANPEDEVNLRRILNVPKRGIGDRAEAAVAMLAERERIGFGEALRRAE
EAPGIATRSLNAVRLFVVMLDELRELSEQGVTPAELLEAILTKSGYYAELQGSDDPQDES
RLENLAELISVAAEFEAQQEAMAAAASEAEDEELDGAVGADGADGTATSDGAGAATAGGA
TAGGADAASAAEGAGDGAAGTRLPSVEDPDATLLDAFLEKVALVADADQVPGGEDQFVTL
MTLHTAKGLEFPVVFLTGMEDGTFPHQRTLSDPTELEEERRLAYVGITRAREKLYLTRAQ
MRATWGAPQFMPASRFLDEVPDEVLDVARAGSSLSGVGYGGRGGSGGYGSSGGSGGRGPS
FSGGIGGGRSDVRRTSSFGSGRTPTPTASLPQLAVGDRVTHDSFGMGMVSEVAGQGEKTQ
VEVQFKAPHGTKRLLLRYAPLTKL
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagctcactcttcgacgacctctccctccccgactccttccgcaccctcgaaggggtg
cgtgcggatccggccgcccccgcgcgccgggacgatctcgaggcggacgtcccgccggag
gaggcgcccgtcgaggacgccccgccggaggaggacggccccgaggaggaggatcccttc
gcgggggacgccccgtggaccccggccccgcccgcgctgcagcaggccgtcgcccgcgtg
cccgcgccgcgccgccaggtcgaccccgccgccctcgccgtgctcgtcgaggacctcaac
gggccccagcgcgaggccgtcgagcaccgcggcgggccgctgctgatcgtcgccggcgcc
ggctccggcaagacccgggtcctcacccggcgcatcgcccacctgctccgctccggcgag
gcgctgcccggcgagatcctggcgatcaccttcacgaacaaggccgccgcggagatgcgc
gaacgcgtcgcggagctcgtgggccccgcgtcggccggtatgtgggtctccaccttccac
agcgcctgcgtgcggatcctgcgccgcgacgcgcaggcggcgggcctgaagagctccttc
acgatctacgacagcgcggactccctgcggctgatcaccacgatctccaaggacctcgag
ctggacacgaagaagaacgcgccgcgcgcgatcgcggcgcggatctccgcgctcaagaac
gagctcgtggacccgatcgacttcgcggaccaggcggagaccgcgaagaaccccttcgag
aagaccctcgcgcgcatctacacgaactacaccgagcgcctccgccaggcgaacgcggtg
gacttcgacgacctgatcggcctcacggtgcagatgctgcgggagaacccggcgatccgc
gagggctaccggcgccgcttccgccacctcatggtggacgagtaccaggacacgaacccc
gcccagtacgcgctcgtccaggagctcgtgggggaggacccgcgggcggacctcaccgtc
gtcggcgactccgaccagtccatctacgcgttccgcggtgcgacgatccgcaacatcgtc
gagttcgagcaggacttcccctccgcgcgcacgatcgtgctggagcagaactaccgctcg
acgcagaacatcctctccgcggcgaacacgctcatcgcgggcaacgaggggcggcgccgc
aagaacctgtggaccgaccacggctccggggagaagatcaccctctacgtcgctgacgac
gaggcctccgaggcgcgctacatcggccggcagatcgacgccctcgtcgacgccgggcgc
cgcgcgggcgacgtcgcgatcttctaccgcgccaacgcccagtcgcgcgcgctcgaggac
cagctgatccgcgtgggcctgccgtacaaggtcgtgggcgggacgcgcttctacgagcgc
cgggagatcaaggacgccctcgcctacctgcaggtcctcgcgaaccccgaggacgaggtc
aacctgcgccgcatcctcaacgtgcccaagcgcggcatcggggaccgggcggaggccgcg
gtcgccatgctcgccgagcgggagcggatcgggttcggcgaggcgctgcgccgcgccgag
gaggcgccgggcatcgccacgcgctccctgaacgccgtgcgcctgttcgtcgtcatgctc
gacgagctgcgggagctgagcgagcagggcgtgacgcccgcggagctgctcgaggcgatc
ctcacgaagtccggctactacgcggagctccagggcagcgacgacccgcaggacgagtcg
cgtctcgagaacctcgcggagctcatcagcgtcgccgccgagttcgaagcgcagcaggag
gccatggccgccgccgcgagcgaggcggaggacgaggagctcgacggagccgtcggcgcg
gacggggccgacggcaccgccacgtccgacggggccggggccgccacggccggcggggcc
accgccggaggggccgacgcggcgtcggccgccgagggcgcgggggacggcgcggcgggc
acgcgcctgccgagcgtcgaggaccccgacgcgacgctgctggacgccttcctcgagaag
gtcgcactcgtggcggatgcggaccaggtccccgggggtgaggaccagttcgtcaccctc
atgaccctccacaccgcgaagggtctcgagttcccggtcgtgttcctcaccggcatggag
gacggcaccttcccgcaccagcgcaccctctctgatcccacggagctcgaggaggagcgg
cggctcgcgtacgtgggcatcacccgtgcccgcgagaagctctacctcacgcgcgcccag
atgcgcgcgacctggggcgccccgcagttcatgcccgccagccgcttcctcgacgaggtc
cccgacgaggtgctcgacgtcgcgcgcgccggctcctcgctgagcggcgtgggctacggc
ggccggggcggctccggcgggtacgggagctcgggcggatccggtggtcgcgggccctcc
ttctccggcgggatcggcggcggccgcagcgacgtcaggcgcacgagcagcttcggctcg
ggccgcacgcccaccccgaccgcgtcgctcccgcagctcgcagtgggggaccgggtcacc
catgactccttcggcatgggcatggtctccgaggtcgccggccagggggagaagacccag
gtcgaggtgcagttcaaggcgccgcacggcaccaagcggctgctgctgcgctacgccccg
ctcacgaagctctga
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