KEGG   Bradyrhizobium cosmicum: S23_02020
Entry
S23_02020         CDS       T01796                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
brs  Bradyrhizobium cosmicum
Pathway
brs03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:brs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    S23_02020 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:brs03021]
    S23_02020 (rho)
   03019 Messenger RNA biogenesis [BR:brs03019]
    S23_02020 (rho)
Transcription machinery [BR:brs03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     S23_02020 (rho)
Messenger RNA biogenesis [BR:brs03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     S23_02020 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 AAA_22 NACHT S1CSD-TOTE-2 AAA Fungal_virus_P2_C DUF5817_CT Spore_III_AA
Other DBs
NCBI-ProteinID: BAL73428
UniProt: A0AAI8M8P1
LinkDB
Position
209108..210373
AA seq 421 aa
MREIKLQDLKSKTPAELVSFAEEHGVENASTMRKQELLFAILKQLALAETDIVGEGVVEV
LSDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTIEGHIRSPKEGERYFALLKVN
TLNFEDPEKARHKVNFDNLTPLFPNQRFRMEIDDPTRKDLSARVIDIVAPIGKGQRALIV
APPRTGKTVLMQNIAHSITHNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAV
RHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDRKVSDKRTFPA
IDISRSGTRKEELITDPQVLKKMYVLRRILNPMGTMDAIDFLLDKLRSTKSNSEFFDSMN
T
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcgggaaattaaactccaggacctcaagtcgaagacgccggccgaactcgtctcgttc
gcggaagagcatggggtcgagaacgccagcaccatgcgcaagcaggaattgctgttcgcc
atcctcaagcagcttgcgctcgcggaaaccgatatcgtcggcgaaggcgtcgtcgaagtg
ctctccgacggtttcggcttcctccgctcgcccgatgcgaattatctgccgggcccggac
gacatctacgtttcgccgtcgcagatccgccgtttcggcctgcggaccggcgacaccatc
gaaggccacatccgcagcccgaaagagggcgagcgctatttcgcgctgctgaaggtcaac
acgctcaatttcgaggacccggaaaaggccaggcacaaggtcaatttcgacaacctcacg
ccgctgtttccgaatcagcgttttcgcatggaaatcgacgatccgacgcgaaaagacctt
tctgcaagggtgatcgacatcgtcgcgccgatcggcaagggccagcgcgcactgatcgtg
gcgccgccgcgcacgggcaaaaccgtgctgatgcagaacatcgcgcattcgatcacgcac
aaccatcccgaatgctatctgatcgtgctgctgatcgacgaacgtccggaagaagtcacg
gacatgcagcgctcggtgaagggcgaggtcgtgtcctcgaccttcgacgaaccggcagtg
cgtcacgtccaggtcgccgagatggtgatcgagaaggccaagcgactggtcgagcatggc
cgcgacgtcgttatcctgctcgattcgattacgcgcctcggccgcgcctacaacaccgtg
gtgccgtcatcgggcaaggtgctgaccggcggtgtcgatgccaacgcgctgcagcgcccg
aagcgcttcttcggtgccgcccgcaacatcgaagagggtggctcgctgaccatcatcgcg
accgcgctggtcgataccggcagccgcatggacgaagtcatcttcgaagagttcaagggc
accggtaactcggaactgatcctggaccgcaaggtttcggacaagcggaccttcccggcg
atcgatatctcgcgctccggcacgcgcaaggaagagctcatcaccgacccgcaggtgctc
aagaagatgtacgtgctccgccgcatcctcaacccgatgggcacgatggacgcgatcgac
ttcctgctcgacaaactgcgctcgaccaagagcaattcggagttcttcgactccatgaat
acctga

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