Bradyrhizobium cosmicum: S23_03640
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Entry
S23_03640 CDS
T01796
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
brs
Bradyrhizobium cosmicum
Pathway
brs00300
Lysine biosynthesis
brs00470
D-Amino acid metabolism
brs01100
Metabolic pathways
brs01110
Biosynthesis of secondary metabolites
brs01120
Microbial metabolism in diverse environments
brs01230
Biosynthesis of amino acids
Module
brs_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
brs00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
S23_03640 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
S23_03640 (dapF)
Enzymes [BR:
brs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
S23_03640 (dapF)
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Paralog
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GFIT
Motif
Pfam:
DAP_epimerase
Response_reg
DUF2924
Motif
Other DBs
NCBI-ProteinID:
BAL73587
UniProt:
A0AAI8M8P4
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All DBs
Position
365594..366469
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AA seq
291 aa
AA seq
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MSALANHAFAKMNGIGNEIVVVDMRDSASPVTPDDARAVASAQGGVPYDQLMVLQKPRLD
GTEAFIRIYNNDGSEAGACGNGMRCVVRRIFEKTGQATATFETAAGLLNAWQGPAPDLYT
VDMGVPKFGWQDIPLAEEFRDTRYIELQIGPIDNPILHSPSVVSMGNPHAIFWVEDVNAY
DLERFGPLLENHPIFPERANITLAQIVDREHITMRTWERGAGLTRACGSAACATAVAAAR
LKRTERKVEMTLPGGKLGIEWRERDDHVLMTGTATFEYEGKFDPALFAPVG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggccaaccacgcatttgccaagatgaacggcatcggcaacgaaatcgtt
gtcgtcgacatgcgcgattccgcctcaccggtgacgccggacgacgcccgtgcggtggca
tccgcgcaaggcggcgtgccttacgaccagctgatggtgctgcagaagccccggctggac
ggcaccgaagcgttcatccgcatctacaacaatgacggttccgaggccggcgcctgcggc
aacggcatgcgctgtgtcgtgcgccgcatcttcgagaagaccggccaggccacggctacg
ttcgagacggccgcgggcctgctcaatgcctggcagggtccggcgccggatctctacacg
gtcgacatgggggtgccgaagttcggctggcaggacattccgctggcggaagagtttcgc
gacacccgctacatcgaattgcagatcggaccgatcgacaatccgatcctgcattcgccc
tcggtggtgagcatgggcaatccgcatgcgatcttctgggtcgaggacgttaatgcctac
gatctcgagcgctttggtccgctgttggaaaaccacccgatcttccccgagcgtgccaac
atcacgctcgcacagatcgtcgatcgcgagcacatcacgatgcgcacctgggagcgcggc
gccggcctgaccagggcctgtggttcggcggcctgcgcgaccgccgttgcggcggcgcgg
ctgaagcgcaccgagcgcaaggtcgagatgacgctgcccggcggcaagctcggcatcgaa
tggcgcgagcgcgacgaccacgtgctgatgacgggcaccgcgaccttcgaatacgaaggc
aagttcgatccggcgctgttcgcgccggtcggctga
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