Bradyrhizobium cosmicum: S23_28240
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Entry
S23_28240 CDS
T01796
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
brs
Bradyrhizobium cosmicum
Pathway
brs03420
Nucleotide excision repair
brs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
brs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
S23_28240 (uvrD)
03430 Mismatch repair
S23_28240 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brs03400
]
S23_28240 (uvrD)
Enzymes [BR:
brs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
S23_28240 (uvrD)
DNA repair and recombination proteins [BR:
brs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
S23_28240 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
S23_28240 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
HHH
AAA_12
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
BAL76034
UniProt:
A0AAI8MCL3
LinkDB
All DBs
Position
complement(2930466..2932523)
Genome browser
AA seq
685 aa
AA seq
DB search
MATYLDTLNAEQRRAVEHGVGDGVTVGAPLLVIAGAGSGKTNTLAHRVAHLIVAGADPRR
ILLMTFSRRAAAEMAGRVERIARKVLGENNAAIMRDALTWAGTFHGIGARLLREYAERIG
VDPAFTIHDREDSADLMNLVRHERGLSKTESRFPAKGTCLSIYSRCVNAEMEIEKVLGAH
YPWCAGWAAELKGLFAAYVEAKQAQHVLDYDDLLLYWSQMMSDALISEEIGGRFDHVLVD
EYQDTNRLQSSILLALKPDGRGLTVVGDDAQSIYSFRAATVRNILDFPQSFSPRAEMITL
DRNYRSTQPVLAAANGVIGLARERFTKNLWTDRAGSHKPQLVTVHGEADQARYIVEEVLA
NREQGALLKHQAVLFRTSSHSGPLEIELTRRNIPFVKFGGLKFLDAAHVKDVLALLRFAE
NPRDRVAGFRILHLLPGVGPATAQRVLDQMAESMDPLAALGQLPVPARTGTDWTDFVRTV
ENLRYSEWPVDLERVRLWYEPHLDRIHEESETRRADLMQLEQIASGYPSREKFLTELTLD
PPDATSDKSGPPLRDEDYLILSTIHSAKGQEWKSVFVLNVVDGCMPSDLGAGTSAELEEE
RRLLYVAMTRAKDDLHLVVPQRFFVHGQAAKGDRHVYASRTRFIPESLVYLFERTAWPKA
AAGAARTGAQGPKVDIGARMRGMWR
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacatatctggatacgctcaatgcggagcagcgccgcgccgtggagcatggcgtg
ggcgacggcgtgaccgtgggcgcgccgctgctcgtcattgccggtgccggctcgggcaag
accaacacgctggcccaccgcgtcgctcacctgatcgtcgcaggcgcagatccgcgccgc
atcctgctgatgacgttctcccgccgcgccgcggccgagatggccggccgggtcgagcgt
atcgcccgaaaggtgctcggcgagaacaacgccgcgatcatgcgcgatgccctcacctgg
gccggcaccttccacggcatcggcgcgcggctgctccgcgaatatgccgagcgcatcggc
gtcgatcccgccttcaccatccacgaccgcgaggattccgccgacctgatgaatctggtc
cggcatgagcgcggattgtcgaagaccgagagccgctttcccgccaagggcacctgcctg
tcgatctactcgcgctgcgtcaatgccgagatggagatcgagaaggtgctgggggcgcac
tatccctggtgcgccggctgggccgccgagctgaagggcctgttcgcggcctatgtcgaa
gccaagcaggcccagcacgtgctcgattacgacgacctgctgctctactggtcgcagatg
atgagcgacgcgctgatctcggaagaaatcggcggccgcttcgatcacgtcctggtcgac
gaatatcaggacaccaaccgcctgcaatcctcgatcctgctggcgctcaagcccgacggc
cgcgggctcaccgtggtcggcgacgacgcgcagtcgatctactcgttccgcgccgccacc
gtgcgcaacatcctggacttcccgcagagcttctcgccgcgggccgagatgatcacgctc
gaccgcaattaccgctcgacgcagccggtgctggcggcggccaacggcgtcatcggcctt
gcccgggagcgcttcaccaagaacctctggaccgatcgcgccgggtcgcacaagccgcag
ctcgtcaccgtgcacggcgaagccgaccaggcccgctacatcgtcgaggaggtgctggcc
aaccgcgagcaaggcgcgctgctcaagcaccaggcggtgctgttccgcacatcgtcgcat
tcgggtccgctggagatcgagctgacccgccgcaacattcccttcgtgaagttcggcggg
ctgaaattcctcgacgccgcgcacgtcaaggacgtgctggcgctgctgcgctttgccgaa
aatccgcgcgaccgcgtcgccggctttcgcatcctgcatctgttgcccggcgtcggcccg
gcgaccgcgcagcgcgtgctcgaccagatggccgagagcatggatccgctggccgcactc
ggccagctcccggtgcccgcgcgcaccggcaccgactggaccgacttcgtccgcaccgtc
gagaatctgcgttattcggaatggcctgttgatctcgaacgcgtacggctgtggtacgaa
ccgcatctcgatcgcatccacgaggagtccgagacgcgccgtgccgacctgatgcagctc
gagcagatcgcgagcggctatccctcgcgcgagaaattcctcacggagctcacgctcgat
ccaccggatgcgaccagcgacaaatccgggccgcccttgcgcgacgaggattatctgatc
ctctccaccattcattccgccaagggccaggagtggaagtcggtgttcgtgctcaacgtc
gtcgacggctgcatgccctccgacctcggcgccggcaccagcgccgagctcgaggaggag
cgccgcctgctctatgtcgcgatgacgcgggccaaggacgatttgcatctcgtcgttccc
cagcgcttcttcgtccacggccaggccgccaagggcgaccgccacgtctacgcctcgcgc
acccgcttcatccccgaatccctggtctacctgttcgagcgcaccgcctggccgaaggcc
gccgcaggcgcggcgcgtacgggcgcgcaggggccgaaggtcgacatcggcgcgcggatg
cgggggatgtggcggtag
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