Bradyrhizobium cosmicum: S23_28700
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Entry
S23_28700 CDS
T01796
Name
(GenBank) RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
brs
Bradyrhizobium cosmicum
Pathway
brs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
S23_28700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brs03021
]
S23_28700
03400 DNA repair and recombination proteins [BR:
brs03400
]
S23_28700
Enzymes [BR:
brs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
S23_28700
Transcription machinery [BR:
brs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
S23_28700
DNA repair and recombination proteins [BR:
brs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
S23_28700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
BAL76078
UniProt:
A0AAI8M9P7
LinkDB
All DBs
Position
2969509..2973633
Genome browser
AA seq
1374 aa
AA seq
DB search
MAQQTFTGRKRVRKFFGHIKEVAEMPNLIEVQKASYDQFLMVDEPVGGRLDEGLQAVFRS
VFPISDFSGTSMLEFVRYEFEQPKYDVDECRQRGMTFAAPLKVTLRLIVFDIDEETGAKS
VKDIKEQDVYMGDIPLMTMNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFA
ARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLMFALGLDGEAILSTFYKKILYKRT
KEGWRVPFDANRFRGYSTINDLIDADTGKVVLEAGKKLTVRGARQMQEKGLKALRLSDEE
LVGNYLAEDLVNPKTGEIHAEAGEEITDKSMKALNEHGYKELPLLDIDHVNVGAYIRNTL
AADKNMTREDALFDIYRVMRPGEPPTLDSAQAMFQSLFFDAERYDLSAVGRVKMNMRLDL
DAPDTQRTLRKEDILSVIKTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRM
ERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLS
ALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFVETPY
RKVKDGRVTDEVVYLSAMEEGRYSVAQANVPIDAKGRFTEDLVVCRSSGTRDVVPMTPDK
VDYMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMEGVVA
RDSGAAIAARRSGVIDQIDATRVVIRATEDLDPTKSGVDIYRLMKYQRSNQSTCINQRPL
VKVGDIVKKGDIIADGPSTDLGELALGRNVLVAFMPWNGYNFEDSILLSERIVKEDVFTS
IHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILVGKITPK
GESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTIVEVRVFNRHGVDKDERALAIER
EEIERLAKDRDDEQAILDRNVYNRLAELLEGRQGIAGPKGFKKDTKITRAVLEEYPKSQW
WLFASPNDKLMAEIEAMRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVK
RKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTHADIVLNPLGVPSRMNVGQILETHL
GWACAGLGKRIGQTVDAYLSKQDIKPLKETLKKVYGEDETIKSLNDNELIELGHNLSRGV
PIATPVFDGAKEADIEEMLKLAGLDASGQSTVYDGRTGDAFDRKVTVGYIYMLKLHHLVD
DKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAG
RTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKVGPAPTSEAAE
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagacattcaccggtcgcaaacgcgttcgcaagttcttcggacacatcaag
gaagtcgccgagatgccgaacctcatcgaggttcagaaggcgtcctatgaccagttcctg
atggtcgatgaacccgtgggcggtcgtctcgacgagggcctgcaggccgtgttccgttcc
gtgttcccgatctccgacttctcgggcacatcgatgctggaattcgtccgttacgagttc
gagcagccgaaatacgacgtcgacgagtgccgccagcgcggcatgactttcgcggctccc
ctcaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggaaaccggcgccaagtcg
gtgaaggacatcaaggagcaggacgtctacatgggcgatatcccgctcatgacgatgaac
ggcaccttcatcgtcaacggcaccgagcgcgtcatcgtctcgcagatgcaccgttcgccc
ggtgtgttcttcgaccatgacaagggcaagacccattcttcgggcaagctgctgttcgct
gcccgcgtgatcccgtatcgcggttcctggctcgacatcgagttcgacgccaaggacatc
gtctatgcgcgtatcgatcgtcgccgcaagattccggtgacgtcgctgatgttcgcgctc
ggcctcgacggcgaggcgatcctgtcgacgttctacaagaagattctctacaagcggacc
aaggaaggctggcgcgttccgttcgacgccaaccgtttccgcggctactcaaccatcaac
gacctgatcgacgccgataccggcaaggtcgtgctcgaggccggcaagaagctcaccgtg
cgcggtgcgcgtcagatgcaggagaagggcctgaaggcgctgcgcctgtcggatgaggaa
ctcgtcggcaactatctggccgaggacctcgtcaatcccaagaccggcgagatccacgcc
gaagccggtgaagagatcaccgacaagtccatgaaggccctcaacgagcacggctacaag
gaactgccgctgctcgacatcgaccacgtcaatgtcggcgcctacatccgcaacacgctc
gcggccgacaagaacatgacgcgtgaggacgcgctgttcgacatctaccgcgtgatgcgt
ccgggcgagccgccgacgctggattcggcgcaggcgatgttccagtcgctgttcttcgac
gccgagcgttacgacctctccgcggtcggccgcgtcaagatgaacatgcgcctcgacctc
gatgcgcccgacacccagcgcacgctgcgcaaggaagacatcctctccgtcatcaagacg
ctggtggatctgcgcgacggcaagggtgagatcgacgacatcgaccatctcggcaaccgc
cgtgtgcgctcggtcggcgaactcatggagaaccagtaccgcatcggcttgctccgcatg
gagcgcgccatcaaggagcgcatgtcctcggtcgacatcgacacggtcatgccgcaggac
ctgatcaacgccaagccggcggctgccgccgtgcgcgagttcttcggctcctcgcagctc
tcgcagttcatggaccagaccaacccgctgtcggagatcacccacaagcgccgtctttcg
gcgcttggaccgggcggtctgacccgtgagcgtgccggcttcgaggtgcgcgacgtgcat
ccgacgcattacggccgtatctgcccgatcgagacgccggaaggcccgaacatcggcctg
atcaactcgctcgccaccttcgcgcgcgtgaacaagtacggcttcgtcgagacgccttat
cgcaaggtgaaggacggccgcgtcaccgacgaggtcgtgtacctctcggcgatggaggag
ggccgctactcggtcgcgcaggccaacgtgccgatcgacgccaagggccgcttcaccgag
gatctggttgtctgccgttcgagcggaacccgcgacgtcgtgccgatgacgcccgacaag
gtcgactacatggacgtgtcgccgaagcagctcgtttcggtcgccgcggcgctgatcccg
ttcctcgagaacgacgacgccaaccgcgcgctgatgggttcgaacatgcagcgccaggcg
gtgccgctggttcgcgccgaggctccgttcgtcggcacaggcatggaaggcgtcgttgcg
cgcgactcgggtgccgcgatcgcggcacgccgttcgggcgtgatcgaccagatcgacgcg
acccgcgtcgtcatccgcgccacggaagatcttgatccgaccaagtcgggcgtcgatatc
taccggctgatgaagtaccagcgttccaaccagtcgacctgcatcaaccagcgtccgctg
gtgaaggtcggcgacatcgtcaagaagggcgacatcatcgccgacggtccgtcgaccgat
ctcggcgagctggcgctcggccgcaatgtgctcgtcgcgttcatgccgtggaacggctac
aacttcgaagactcgatcctgctctccgagcggatcgtgaaggaagacgtgttcacctca
attcatatcgaagaattcgaggtgatggcccgcgacaccaagctcggacctgaggaaatc
acccgcgacattccgaacgtctcggaagaagcgctgaagaacctcgacgaagccggtatc
gtctatatcggcgcggaagtgcgcgccggcgacatcctggtcggcaagatcacgccgaag
ggcgaaagcccgatgacgccggaagaaaagctcctgcgcgccatcttcggcgaaaaggcc
tccgacgttcgcgacacctcgctgcgcgttcctccgggcgtgcagggcacgatcgtggaa
gtgcgcgtgttcaaccggcacggcgtcgacaaggacgagcgtgcgttggcgatcgaacgg
gaagagatcgagcgtctggccaaggaccgcgacgacgagcaggcgatcctggaccgcaac
gtctacaaccgtcttgccgagctgctcgaggggcggcagggcattgccggtccgaagggc
ttcaagaaggacaccaagatcacccgtgcggtgctcgaggagtacccgaagtcgcagtgg
tggctgttcgcgtcgccgaacgacaagctgatggccgagatcgaggccatgcggaagcag
tacgacgagtcgaagaaggggctcgagcagcgcttcctcgacaaggtcgagaagcttcag
cgcggtgacgaattgccgcccggcgtgatgaagatggtcaaggtcttcgtcgcggtgaag
cgcaagatccagcccggcgacaagatggccggccgccatggcaacaagggcgtggtgtcg
aaaatcgtgccgatcgaggacatgccgttcctcgaagacggcacgcatgccgacatcgtg
ctcaatccgctcggcgtgccctcgcgcatgaacgtcggacagatcctcgagacccatctc
ggctgggcctgcgccggcctcggcaagcgtatcggccagacggtcgatgcttacctgtcg
aagcaggacatcaagccgctgaaggaaaccttgaagaaggtctacggcgaggacgagacg
atcaagtcgctcaacgacaacgagttgatcgagctcggccacaatctgagccgcggcgtg
ccgatcgcgacgccggtgttcgacggcgccaaggaagccgatatcgaggagatgctcaag
cttgccggtctcgacgcttcgggtcagtcgaccgtctatgacggccgcaccggcgatgcg
ttcgatcgcaaggtgacggtgggctacatctacatgctcaagctgcaccatctggtcgac
gacaagatccacgcgcgttcgatcggtccgtactcgctcgttacccagcagccgctgggc
ggcaaggcgcagttcggtggccagcgcttcggcgaaatggaggtgtgggcgctcgaggct
tacggcgcggcgtacacgctccaggagatgctgacggtgaagtcggacgacgtcgccggc
cgtactaaggtgtacgaggcgatcgtgcgcggcgacgacacgttcgaggccggtattccg
gaatcgttcaacgtgctggtcaaggaaatgcgctcgctcggcctcaacgtcgacctgcac
aattccaaggtgggaccggcgccgacgtcggaagcggccgagtaa
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integrated database retrieval system