Propioniciclava sp. MC1595: J4N02_16120
Help
Entry
J4N02_16120 CDS
T07112
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
brt
Propioniciclava sp. MC1595
Pathway
brt00040
Pentose and glucuronate interconversions
brt01100
Metabolic pathways
brt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
brt00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J4N02_16120
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
J4N02_16120
Enzymes [BR:
brt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
J4N02_16120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
QTE25983
LinkDB
All DBs
Position
3329350..3330519
Genome browser
AA seq
389 aa
AA seq
DB search
MTSSRPDNVFHVSTWQEFRTALGGGGNAARTNTEPRIIYVHGELNAFEAADGTMTTCATF
EEETGFSQAAYIEAFDPYGPWGWKDPEGELVDLQAAAANAQALQTQQHIGSNKTIIGVGD
DARIVGANLRIRDADNVIVRNLTVSDSTDCFPEWDPGDTASGNWNSRYDNISVWTSTHVW
IDHNTLDSGDLPPDALASVYGRPYEVHDGLLDITHSSDLVTVSYNRFEPHDKTMLIGSSD
GRTADRGTLRVTLHHNKWTDIGQRAPRVRYGQVDLYNNYYVQTGPYDWYSYYWGVGRESA
LYAENNYIQLDPANDASTIIAKWGGVAMTEIGTRVNGKKVSALDAYNAANPTDTIGDDAG
WTPQYRLKVDPTMSVPAQVELRAGAGTLR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttgacaagctcacggcccgacaacgtgttccacgtcagcacctggcaggagttccgcacg
gcgctgggtggcgggggcaacgcggcccgcaccaacaccgagccgcggatcatctacgtc
cacggcgagctgaacgccttcgaggccgcggacggcacgatgaccacctgcgcgacgttc
gaggaggagaccggcttcagccaggccgcctacatcgaggcgttcgacccctacggcccg
tggggctggaaggacccggagggcgagctcgtcgacctccaggccgcggcggccaacgcc
caggccctgcagacgcagcagcacatcggctccaacaagacgatcatcggggtcggcgac
gacgcgcgcatcgtgggcgcgaacctgcgcatccgggacgccgacaacgtcatcgtgcgc
aacctcaccgtctccgactccaccgactgcttcccggagtgggatcccggcgacacggcg
tccgggaactggaacagccgctacgacaacatctcggtgtggacctccacccacgtgtgg
atcgaccacaacacgctcgactccggcgacctgccgcccgacgccctggcgtccgtgtac
ggccgcccctacgaggtgcacgacgggctgctcgacatcacgcacagctccgacctcgtg
acggtgtcgtacaaccgcttcgagccgcacgacaagacgatgctgatcggctcctcggac
ggccggaccgccgaccgcggcaccctgcgcgtgaccctgcaccacaacaagtggaccgac
atcggccagcgcgccccgcgcgtccggtacggccaggtcgacctgtacaacaactactac
gtgcagaccggcccgtacgactggtactcctactactggggcgtcggacgtgagtcggcc
ctgtacgccgagaacaactacatccagctcgacccggccaacgacgcctccaccatcatc
gccaagtggggtggtgtggccatgaccgagatcgggacccgggtcaacgggaagaaggtg
tccgcgctggacgcctacaacgccgcgaacccgaccgacacgatcggtgacgacgccggg
tggaccccccagtaccgcctcaaggtcgacccgacgatgtcggtgcctgcccaggtggag
ctgcgcgcgggcgcgggaacgctccgctga
DBGET
integrated database retrieval system
