Brucella sp. BO3: GRI33_00590
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Entry
GRI33_00590 CDS
T10767
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
brub Brucella sp. BO3
Pathway
brub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GRI33_00590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brub03019
]
GRI33_00590
03009 Ribosome biogenesis [BR:
brub03009
]
GRI33_00590
Enzymes [BR:
brub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GRI33_00590
Messenger RNA biogenesis [BR:
brub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GRI33_00590
Ribosome biogenesis [BR:
brub03009
]
Prokaryotic type
rRNA helicases
GRI33_00590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QMV25511
LinkDB
All DBs
Position
1:140651..142531
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AA seq
626 aa
AA seq
DB search
MSLPDTIAPALSGALTARGYNTLTAVQNAVLAPETLASDLLVSAQTGSGKTVAFGLAMAN
TILEDELRFGDAGAPLAMIIAPTRELALQVRRELEWLYADTGARIASCVGGMDIRTERRA
LERGSHIVVGTPGRLRDHITRNALDMSQLRAIVLDEADEMLDMGFREDLEFILGEAPEDR
RTLMFSATVPKPIAQLAKRFQNNALRITVQSETSQHADIDYVAMPVPPHERDHAIINTLL
YYDSQNSIIFCSTREAVKHMASRLSNRGFAVVALSGELSQAERNNALQAMRDGRARVCVA
TDVAARGIDLPNLDLVIHADLPTNPDTLLHRSGRTGRAGRKGTCVLVVPFSRRRSAERLL
HMAKLDAQTVPAPSIAAVQAKTNERILNAEVFNQPVEEEYQELLKALAERYTPEQIASAF
LNREVASYPAAEEVSDAPVHPVGGKKPRSDRFEKGDRYERGERRERGEPGERFDRNARFD
GVWFSVSAGRKHRADPKWLLPLICKAGDVSKRDVGSIKIFDNETRFEIAASKADEFRQSV
AERGTGEKSLVIRTAVAGAGGDAAARESRGSFKPRSDKFKEGGFRDGHKSDKPRDFSRGD
DFKKDGFKKGGKKPEGGGYSKKRRGE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcctgataccatcgctccggctctctccggagcattaaccgctcgcggttac
aatacgcttaccgctgttcagaatgctgttctggcccccgaaacactcgcttccgatctt
cttgtgtctgcccagacggggtctggcaagacggtggcttttggccttgccatggccaac
accattctcgaagatgaactgcgcttcggtgatgcgggtgcgccacttgccatgattatc
gcgccgacgcgcgagctcgcacttcaggtgcgccgtgaactggaatggctttatgccgat
accggcgcgcggattgcatcctgcgttggtggcatggatatccgcaccgagcgccgcgcg
ctggagcggggaagccatatcgtcgtcggcacgccgggccgcctgcgcgaccacattacg
cgcaatgcgctcgatatgtcgcaactgcgcgccatcgtgctcgacgaagccgatgaaatg
ctcgacatgggctttcgcgaagacctcgaatttatcctgggtgaagcgccggaagaccgc
cgtacgctgatgttctcggcaaccgtgccaaagccgattgcccagcttgccaagcgtttc
cagaacaatgcattgcgcatcaccgttcagagcgaaaccagccagcatgccgatatcgat
tatgttgccatgccggttccgccgcatgagcgtgaccatgcgatcatcaatacgctgctt
tattacgatagccagaactcgatcattttctgctccacccgcgaagcggtaaagcacatg
gcaagccgcctttccaatcgcggtttcgcggtggtggcgctttcaggtgagttgagccag
gcggagcgcaacaatgcgcttcaggccatgcgggacgggcgtgcccgcgtctgtgtggcg
accgacgttgccgcgcgcggcatcgacctgcccaatcttgatctggtcatccatgctgat
ctgccaaccaatccggatacgcttctgcaccgttctggccgtacgggccgcgcgggccgc
aagggcacctgtgtcctggttgtgccgttctcgcgtcggcgcagtgccgaacgcctgttg
cacatggcaaagcttgatgcgcagacggttcccgcgcccagcattgctgccgttcaggcc
aagaccaatgagcgcattttgaatgcggaagtcttcaaccagcccgttgaggaagaatat
caggaactgctgaaggctcttgccgagcgttacacgccagagcagattgcgagcgccttc
ctcaatcgcgaagtggcttcctatccggcggcggaagaagtatccgatgcgccggtgcat
ccggttggcggcaagaagccgcgttcggaccgttttgaaaagggtgatcgttatgagcgc
ggcgaacgccgtgagcgtggcgaaccgggcgaacgcttcgaccgcaatgcgcgttttgat
ggcgtctggttctcggtttcggctggccgcaagcaccgcgccgatccgaaatggttgttg
ccgctcatctgcaaggcgggtgacgtatccaagcgcgatgtcggctcaatcaagattttc
gacaatgaaacgcgctttgaaattgcggcatccaaggcggatgaattccgccagtcggtg
gctgaacgcggcacgggcgaaaagagtctcgtaatccgcaccgccgttgctggcgctggc
ggcgatgctgctgcgcgtgagagccgtggcagcttcaagccacgtagcgacaagttcaag
gaaggcggcttccgggacggccacaagagcgataagccgcgcgatttttcccgtggagat
gacttcaagaaagacggcttcaaaaagggcggtaaaaaacccgaaggtggcggatacagc
aagaagcgtcgcggtgaataa
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