Brucella sp. BO3: GRI33_04670
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Entry
GRI33_04670 CDS
T10767
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
brub Brucella sp. BO3
Pathway
brub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GRI33_04670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brub03019
]
GRI33_04670
Enzymes [BR:
brub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GRI33_04670
Messenger RNA biogenesis [BR:
brub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GRI33_04670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QMV26256
LinkDB
All DBs
Position
1:complement(982754..984361)
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AA seq
535 aa
AA seq
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MGRLIFIGFPGLGLVASHLPHRNGPAEEGTRNQFGHDSASRQRVFRRPVVIIKWNYVRQV
ALVRRFKADRECAVPLKEIELTKENTGGFAALGITGVLLKGVEAAGMTEPKPIQTQAIPS
QLEGHDILGIAQTGSGKTAAFSLPILQKIIGLGDKRRPKTARALILAPTRELAVQIEQTI
RNVSKSAHISTALVLGGVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVL
DEADRMLDMGFINDVKRIAKATHAERQTALFSATMPKEIASLAERLLRDPVRVEVAPQGT
TASEITQVVHPVPTKEKRRLLSAMLTDADMRSVIVFTRTKHGADAVVRHLERDRYDVAAI
HGNKSQNARQRALNGFRDGTLRILVATDIAARGIDVPGISHVVNYDLPDEPETYVHRIGR
TGRNGASGASITLYDPATEESKLRAVERVTRSKLSIKDAPVKLAPAPVAKGPAPQGQRTE
QAESRKAPAHKHRRPAQKAGEQHRAGAHTSAGEAAPKPKRPFRRKRRSNGGQRAA
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggccgactgattttcatcggctttcccggacttggacttgttgcgtcacatcttcca
caccggaatggtccggcagaggaagggacccgaaatcagttcgggcacgacagcgcaagt
cgccagagagttttccggcgtcccgtcgttatcattaaatggaattatgttcggcaagtt
gcgcttgtccggcgttttaaagcggaccgcgaatgcgcggtgccgctgaaagagattgaa
ttgacaaaagaaaacacgggcggcttcgccgctctcggtatcaccggcgttctgctcaaa
ggcgtagaagctgccggcatgaccgagccgaaaccgatccagacgcaggccatcccgtca
caacttgaaggccatgatatccttggcatcgcccagacgggttccggcaagacggcggct
ttcagcctgcccatccttcagaaaatcatcggccttggcgacaagcgccgcccgaaaacc
gcacgcgcgctgatcctggcgccaacgcgggaactggcagtacagattgagcagacgatc
cgcaatgtctccaaaagcgcgcatatctcgaccgcgctggttcttggcggcgtgtccaag
ctttcgcagatcaagcgtatcgcacccggcatcgatgtgctcatcgcaacacccggccgc
ctgacggacctgatgcgcgatggcctcgtggacctgtcgcagacccgctggctggttctc
gatgaagccgaccgcatgttggacatgggcttcatcaatgatgtgaaacgcattgccaag
gcaacacacgccgaacgccagaccgctctgttctcggccaccatgccaaaggagatcgca
tcgctggccgaacgtctgctgcgcgatccggtgcgggtggaagttgcgccacagggaacc
acggcttctgaaatcacgcaggtcgtgcatccggtgccgacgaaggagaagcgccgcctg
ctttcagccatgctgaccgatgccgacatgcgttctgtcatcgtcttcacgcgcaccaag
cacggagcagatgccgtcgtgcgccatcttgagcgcgaccgctatgatgttgcggccatc
cacggcaacaagtcgcagaatgcacgccagcgcgcgctgaacggtttccgcgatgggacc
ctacgcattctggttgcaacggatattgcagcacgcggcatcgacgtgcccggcatcagc
catgtggtgaattacgacctgccggacgagccggaaacctatgtgcaccgcatcggccgc
accggccgtaacggcgcaagcggcgcttccatcacgctttatgatccggctacggaagaa
tcaaagctgcgggcggttgagcgcgtcacgcggagcaaactttccatcaaggatgcgccg
gtgaagcttgcaccagcacctgtcgccaaaggccccgcaccccagggccagcggactgaa
caggccgagagccgcaaggcgcccgcgcacaagcatcgccgccccgcacagaaggcgggc
gagcagcatcgcgccggggcacataccagcgccggtgaggccgcgccgaagccgaagcgt
cccttccgccgcaagcgccgcagcaatggcggccagcgcgccgcctga
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