KEGG   Brucella sp. JSBI001: LJ361_04600
Entry
LJ361_04600       CDS       T10240                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
bruc  Brucella sp. JSBI001
Pathway
bruc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bruc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LJ361_04600
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bruc03019]
    LJ361_04600
Messenger RNA biogenesis [BR:bruc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LJ361_04600
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B_2 Lactamase_B RMMBL Anti-Pycsar_Apyc1 Regulator_TrmB
Other DBs
NCBI-ProteinID: UZD70711
LinkDB
Position
967314..968990
AA seq 558 aa
MARSNTTELVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPD
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEHGAPE
IPITIYKAGEKFEVGPFKLEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
IDEARFRAIGDAGVLALICDSTNALREGESPSERQVGESLRELIENARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
LTGSQGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKSILDIKNRLIDRGIKII
GDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQVAQVRD
GDMLRLAPGKAEIIDEAPVGRIYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
IIDEPDLVTFGVPEENAQGDLLEDILLDAAIEAIDSIPRVRRKDIELVRESVRRAVRAAA
NEAWGKKPVVTVFVNRIR
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggcccgatccaatactactgaactcgtctttctgccgcttggcggcgtaggcgaaatc
ggcatgaatttggccatgtatggcttcggtcctgcggataaccgtgaatggcttgtcgtg
gatatgggggtgagctttgcggggcctgaacagccgggtgcggatctcatcctgccggat
atccgctatctcgaggctgaaaagcacaatctgcgcggcatcgttatcacccatgcgcat
gaagaccatttcggtgctttgctcgatctgtggccgcgcctgaaggttccggtttatgcg
acgccattcaccgccggtctgcttgaagccaagcgacagtcggaacatggcgcgcccgaa
attccaatcacgatctacaaggcaggcgagaaattcgaagtcgggcctttcaagctcgaa
gctgtcgcagtaacccactccattcccgagccggtttcgctggctattacgacaccgctc
ggcacggtcgtgcatacgggtgactggaagatggacccggaaccatcgctcggaccggtt
atcgatgaggcgcgtttccgcgctatcggtgatgcaggcgttctggcgctgatctgcgat
tccaccaatgctttgcgcgagggcgagtctccttcggaacgtcaggtgggcgagagcctg
cgcgagttgattgaaaatgcgcgcggtcgtgtggccatcaccactttctcttccaatgtc
ggtcgtatccggtcgattaccgaagcagcacgcgatgctggccgtcaggtgctggtggtt
gggcgttcgatgaagcgcgccatctccgtcgccacagaacttggctatatggaaggcttg
ccggaatatctcagcgaagaggattacggctatattccacgcgaaaacgtggtgatgatc
cttaccggcagtcagggcgaaccgcgcgcggcactcgccaaactggcgcgtgacgaaatg
cgcagcctcgcgctgacggcgggcgatacggtcatttattcatcgcgtgccatcccgggc
aatgaaaaatccattctcgacatcaagaaccgcctgattgatcgtggtatcaagatcatc
ggtgatgaggatgcattggtccatgtgtcgggccatccacggcgcagcgaattacgtcgc
atgtattcctgggttcgtccgcaaattctggtgccggtgcatggcgaagccgctcatctg
gtcgcgcaaggttctcttggcgcgatggagggcatcgagcaggtcgcgcaggtgcgtgac
ggcgacatgctgcgtctggcacccggcaaggccgaaattatcgatgaagcgccggttggc
cggatttacaaggacggcaagctgatcggtgacgaggaagaaatcggcatggtcgagcgt
cgcaagctcgcttatgtcggtcatgtcgccgtttcggtgctgctggaccgtgaacacaag
atcatcgatgagcccgaccttgtgactttcggggtgccggaggaaaacgcacagggcgat
ctgttggaagacatcctgctggatgcagccatcgaggccatcgacagcattccgcgcgtt
cgccgcaaggatatcgagcttgtccgggagtccgtgcgccgtgccgttcgcgctgcggca
aatgaagcatggggcaaaaagccggtagtgaccgtattcgtgaataggatacggtag

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