Brucella sp. JSBI001: LJ361_04600
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Entry
LJ361_04600 CDS
T10240
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bruc Brucella sp. JSBI001
Pathway
bruc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bruc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LJ361_04600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bruc03019
]
LJ361_04600
Messenger RNA biogenesis [BR:
bruc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LJ361_04600
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B_2
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Regulator_TrmB
Motif
Other DBs
NCBI-ProteinID:
UZD70711
LinkDB
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Position
967314..968990
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AA seq
558 aa
AA seq
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MARSNTTELVFLPLGGVGEIGMNLAMYGFGPADNREWLVVDMGVSFAGPEQPGADLILPD
IRYLEAEKHNLRGIVITHAHEDHFGALLDLWPRLKVPVYATPFTAGLLEAKRQSEHGAPE
IPITIYKAGEKFEVGPFKLEAVAVTHSIPEPVSLAITTPLGTVVHTGDWKMDPEPSLGPV
IDEARFRAIGDAGVLALICDSTNALREGESPSERQVGESLRELIENARGRVAITTFSSNV
GRIRSITEAARDAGRQVLVVGRSMKRAISVATELGYMEGLPEYLSEEDYGYIPRENVVMI
LTGSQGEPRAALAKLARDEMRSLALTAGDTVIYSSRAIPGNEKSILDIKNRLIDRGIKII
GDEDALVHVSGHPRRSELRRMYSWVRPQILVPVHGEAAHLVAQGSLGAMEGIEQVAQVRD
GDMLRLAPGKAEIIDEAPVGRIYKDGKLIGDEEEIGMVERRKLAYVGHVAVSVLLDREHK
IIDEPDLVTFGVPEENAQGDLLEDILLDAAIEAIDSIPRVRRKDIELVRESVRRAVRAAA
NEAWGKKPVVTVFVNRIR
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcccgatccaatactactgaactcgtctttctgccgcttggcggcgtaggcgaaatc
ggcatgaatttggccatgtatggcttcggtcctgcggataaccgtgaatggcttgtcgtg
gatatgggggtgagctttgcggggcctgaacagccgggtgcggatctcatcctgccggat
atccgctatctcgaggctgaaaagcacaatctgcgcggcatcgttatcacccatgcgcat
gaagaccatttcggtgctttgctcgatctgtggccgcgcctgaaggttccggtttatgcg
acgccattcaccgccggtctgcttgaagccaagcgacagtcggaacatggcgcgcccgaa
attccaatcacgatctacaaggcaggcgagaaattcgaagtcgggcctttcaagctcgaa
gctgtcgcagtaacccactccattcccgagccggtttcgctggctattacgacaccgctc
ggcacggtcgtgcatacgggtgactggaagatggacccggaaccatcgctcggaccggtt
atcgatgaggcgcgtttccgcgctatcggtgatgcaggcgttctggcgctgatctgcgat
tccaccaatgctttgcgcgagggcgagtctccttcggaacgtcaggtgggcgagagcctg
cgcgagttgattgaaaatgcgcgcggtcgtgtggccatcaccactttctcttccaatgtc
ggtcgtatccggtcgattaccgaagcagcacgcgatgctggccgtcaggtgctggtggtt
gggcgttcgatgaagcgcgccatctccgtcgccacagaacttggctatatggaaggcttg
ccggaatatctcagcgaagaggattacggctatattccacgcgaaaacgtggtgatgatc
cttaccggcagtcagggcgaaccgcgcgcggcactcgccaaactggcgcgtgacgaaatg
cgcagcctcgcgctgacggcgggcgatacggtcatttattcatcgcgtgccatcccgggc
aatgaaaaatccattctcgacatcaagaaccgcctgattgatcgtggtatcaagatcatc
ggtgatgaggatgcattggtccatgtgtcgggccatccacggcgcagcgaattacgtcgc
atgtattcctgggttcgtccgcaaattctggtgccggtgcatggcgaagccgctcatctg
gtcgcgcaaggttctcttggcgcgatggagggcatcgagcaggtcgcgcaggtgcgtgac
ggcgacatgctgcgtctggcacccggcaaggccgaaattatcgatgaagcgccggttggc
cggatttacaaggacggcaagctgatcggtgacgaggaagaaatcggcatggtcgagcgt
cgcaagctcgcttatgtcggtcatgtcgccgtttcggtgctgctggaccgtgaacacaag
atcatcgatgagcccgaccttgtgactttcggggtgccggaggaaaacgcacagggcgat
ctgttggaagacatcctgctggatgcagccatcgaggccatcgacagcattccgcgcgtt
cgccgcaaggatatcgagcttgtccgggagtccgtgcgccgtgccgttcgcgctgcggca
aatgaagcatggggcaaaaagccggtagtgaccgtattcgtgaataggatacggtag
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