Brevibacillus ruminantium: NDK47_12145
Help
Entry
NDK47_12145 CDS
T09631
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
brum
Brevibacillus ruminantium
Pathway
brum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
brum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NDK47_12145 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
brum03019
]
NDK47_12145 (pnp)
03016 Transfer RNA biogenesis [BR:
brum03016
]
NDK47_12145 (pnp)
Enzymes [BR:
brum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NDK47_12145 (pnp)
Messenger RNA biogenesis [BR:
brum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NDK47_12145 (pnp)
Transfer RNA biogenesis [BR:
brum03016
]
Prokaryotic type
tRNA degradation factors
NDK47_12145 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
Phi812_weld_lid
Bestrophin-like
SPATA25
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
USG67978
UniProt:
A0ABY4WLE0
LinkDB
All DBs
Position
2462658..2464796
Genome browser
AA seq
712 aa
AA seq
DB search
MEQQFRTYEFELAGRKLTLEFGKMAKQAQGSVLVRYGDTAILSAVTVSKEAKPIDFFPLT
VNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFPEGFRNDVQVVNTVLSV
DQDCSPEIAAMIGTSAALCVSEIPFAGPIAGVIVGRVDGNLVVNPTVQQMERSDIHLVVA
GTRDAINMVEAGANQVPEAVMLEAIMTGHDVIKQLVVFQDQIVAEIGKEKMAVVLHEVDA
KVNQAVRDYAEARLKEAIRIEEKQARYDAIDAIKAETRQHFAEADPAAYAEQERAIDEVL
GNIVKEEVRRLITHDKIRPDGRALSEIRPLSSETHVLPRTHGSGLFTRGQTQALSVCTLG
ALGDVQILDGLGLEETKRFMHHYNFPPYSVGEARPLRPPGRREIGHGALGERAIEPIIPS
ETEFPYTIRLVSEVIESNGSTSQASICASVLALMDAGVPIKAPVAGIAMGLIMGEDGETF
SILTDIQGMEDHLGDMDFKVAGTEAGVTAIQMDIKIAGINREILEQALEQAREGRLTILK
HMLSTISEPRSTLSPYAPKILTMQINPDKIRDVIGPQGRIINKIIDETGVKIDIEQDGRI
FIASVDHEANLRAKQIIEDLVREVALGQTYLGTVKRVEKYGAFVELFAGKEGLCHISQLA
EERVAKTEDVVSVGDKIMVKVTEIDDQGRINLSRKAVLKEQQAAKDAAVKAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacaattccgtacatatgagtttgaactggcaggccgcaaactgacgctggaa
tttggcaagatggcaaagcaggcgcaaggttcggtcctggttcggtacggcgatacggca
atcctttcagccgtgacggtatctaaggaagcgaagccaattgatttcttccccttgact
gtcaactatgaggagcgcctctacgctgtaggtaaaatccccggaggctttatcaagcgg
gaaggacgtccaagtgagaaagcgatcttggccagccgtttgattgaccgtcccatccgt
ccgctttttcccgaaggattccgcaatgatgtacaggtggtaaacaccgtgctttccgta
gatcaggactgctctccggaaatcgctgccatgatcggaacctcggccgctttatgtgtc
tccgaaattccgtttgcgggaccgattgccggtgtgatcgtcggccgtgttgacgggaat
ctcgtcgtaaatccaactgttcagcagatggaaagaagtgacatccacctggttgtcgct
ggtacccgtgatgcaatcaacatggtggaagcaggtgccaaccaagtgcctgaagctgtc
atgctggaagccatcatgaccggtcatgatgtgatcaagcaattggtagtgttccaagac
cagatcgtcgcagaaatcggcaaggaaaaaatggcagtggtgctccatgaagtggatgcg
aaggtcaatcaggctgttcgtgattacgcagaagcacgcctgaaagaagcgattcgcatc
gaagaaaagcaagctcgctatgatgccatcgatgcaatcaaggcagagactaggcagcat
tttgcagaagccgatccggcagcatatgctgagcaggagcgcgcgatcgatgaagtgctt
ggaaacatcgtcaaagaagaagtgcgccgcttgattacacacgataagatccgcccggat
ggacgggctttaagcgaaattcgcccgttgtccagcgagactcatgtattgccaaggacg
catggttccggtctgtttactcgtggtcagacacaagccctcagcgtctgcacactgggt
gccctgggtgatgtacagattctcgatggactcggtctggaagaaaccaagcgcttcatg
catcactacaacttcccgccatacagtgtcggggaagcaagaccgctgcgtccgccgggc
cgtcgtgaaatcggtcatggtgcattgggcgagcgtgccatcgaacccattattccgtct
gaaacagaatttccgtatacgattcgattggtatccgaagtaatcgaatccaacggctct
acatcacaggcttcgatctgcgcaagcgtacttgccttgatggatgccggtgtgccgatc
aaagcccctgttgccggtattgccatgggactgattatgggagaggacggggagacattc
tccattctgactgatattcagggcatggaagaccacctgggcgatatggacttcaaggtt
gccgggacggaagctggcgttaccgcgattcagatggatatcaaaatcgccgggattaac
cgcgaaattctggaacaggcgctggaacaggcgagagagggtcgcttgactatcctcaag
catatgctcagcacgatttccgaaccgcgttccacgctgtctccatacgcaccaaagatt
ctcaccatgcaaatcaatccggacaagattcgcgatgttatcggaccacaaggccgcatc
atcaacaagatcatcgacgaaaccggagtcaaaatcgatatcgaacaagacggccgcatc
ttcatcgcgtcagttgatcacgaagcgaacctccgggcgaaacagattatcgaagatctg
gtgcgtgaggttgccctgggtcaaacctatctgggtaccgtaaaacgggtagaaaaatac
ggcgcatttgtggagctcttcgcaggcaaggaaggactttgccatatttcccagctcgct
gaggagcgtgtggcgaagacggaagatgtcgtgtccgttggcgacaagatcatggtaaaa
gtaacggaaatcgatgatcaaggccgcatcaacctgtcccgcaaagccgtccttaaggaa
cagcaggcagcgaaggacgccgcagttaaagcagaataa
DBGET
integrated database retrieval system
