Brevibacillus ruminantium: NDK47_18140
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Entry
NDK47_18140 CDS
T09631
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
brum
Brevibacillus ruminantium
Pathway
brum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NDK47_18140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brum03400
]
NDK47_18140
Enzymes [BR:
brum01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NDK47_18140
DNA repair and recombination proteins [BR:
brum03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NDK47_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
AAA
nSTAND3
AAA_16
TsaE
AAA_25
AAA_29
AAA_28
T2SSE
NTPase_1
Zeta_toxin
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
USG64069
UniProt:
A0ABY4WFG4
LinkDB
All DBs
Position
complement(3633036..3635294)
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AA seq
752 aa
AA seq
DB search
MSQQTLPLFAEPFVRGSIVQEIFYNEETWYGVIRLKVEETSEAIKESEVVVVGNFPRPHP
EELYTFYGEWKTHPRFGQQFVASRYERETPKTVAGVEKYLASGLFQGIGKKMAKRIVEHL
GVEALSIIADRPEALVEIPGITENRAKQIYESVMEHRSLEQAMVFLYEFGIGVQLALRIY
QTYKLETMKVLTEEPYRLIEDVQGIGFKRADEIARSTGIAASSEERVQAAAIFTLQEASY
AEGHVFLPIAELCEKTLRLLHECGGHRFSPEEMELAIEGLFVVSKVMWDEERVYLPSLFF
AEVGLAKRLRFFADRDEFGSFPVSELYHALGAVEEELAITYAQTQRDAIEQAIKSGLMLL
TGGPGTGKTTVIRGICRVFAHLHGISFDLRKYDETNPFPIVLAAPTGRAAKRMTETTGLP
AMTIHRLLGWKGESFEHDGEHPIRGKLLIVDEMSMVDIWLANQLFRALPNDIQVILVGDP
DQLPSVGPGNVLQDMIRSGLLPRVQLTEIYRQAQESSIIRLAHDVRKGIVPSDLLKSSPD
RRFFTSSPHEVNEAVKQICLGAVKKGYTAKDVQVLAPMYKGNAGVNRLNEELQELFNPKV
GQKREVTFGETAFRTGDKVLQLVNNAEEQVFNGDMGEIVAIFYPNENAENEEMIVVSFDG
REVTYKRSAYHQLTLAYCCSVHKSQGSEFPIVVMPFVKNYHRMLRRKLVYTGITRSKSFL
IMCGEPEAFRIAVQSNEEGVRYSYLEERLKQG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcaaacactccctttgtttgccgaaccgtttgttcgtggatcgatcgttcaa
gaaattttttacaatgaagaaacgtggtacggagttattcgtcttaaagtagaggagact
tcggaagcgatcaaagaatctgaggtggtcgtagtcggaaattttccaaggccgcatcct
gaagaactttacacattctacggagaatggaaaacacacccccgttttgggcagcaattt
gtcgcttcccgctatgagcgcgaaacgccgaaaacggtggctggcgtcgaaaaatacctg
gccagtggcctcttccagggaatcggaaaaaagatggcgaaacggatcgtggagcatctc
ggtgtcgaagcgctatccatcatcgcagaccgtcccgaagcattggttgagatacccggg
attacggaaaaccgtgccaagcaaatttatgaatcggtgatggaacatcgttccttggaa
caggccatggtgtttttgtatgagttcggaatcggggttcaactggcattgcgcatctac
cagacctacaagctggaaacgatgaaggtgctcacagaggaaccttaccgcctgattgag
gatgtgcaggggataggcttcaagcgggcggatgagatcgctcgttcgaccgggattgcc
gcctcttcggaagaacgcgtccaggcagccgcgatttttacgcttcaagaagcctcttat
gccgaaggacacgtttttctccccattgcagagctttgtgaaaaaacactgcgtttgctg
catgaatgcggcggccaccgcttttcgccagaggagatggagcttgcgatagagggcttg
ttcgtggtatccaaagtgatgtgggacgaggagcgggtatacctccccagcctctttttt
gctgaagtaggactggccaaacgacttcgttttttcgccgatcgtgacgaatttggttcg
tttcctgtctcggagctgtaccatgcgctcggcgcagtcgaagaagaattggccatcacc
tatgcccaaacacaacgcgacgcgattgagcaagcgatcaaatctgggctgatgctgctg
acgggaggaccggggactgggaaaacaacggtcattcgcgggatttgccgagtgtttgcc
catctgcatggtatttcctttgacctgagaaaatacgacgaaaccaatcctttccccatc
gtactggctgcaccaacaggccgtgctgccaagcgaatgacagagacaaccggattgccg
gccatgacaattcaccgtttgctcggctggaagggcgagagcttcgaacatgacggagaa
cacccgatccgcggaaaactcctgattgttgacgagatgtcgatggtcgatatttggctg
gccaaccagttgttcagagcgttgccaaatgacattcaggtgattctcgtcggggacccg
gaccagttgccctctgtcggcccgggcaacgtgctgcaggatatgatccgctcgggacta
ttgccgcgggttcagcttacggaaatctaccggcaagcccaggaatcttcaatcattcgt
ctcgcccatgatgtgcgaaaagggatcgttccgtccgatctgttgaaatcctcaccggat
cgaagatttttcacaagttcgccacatgaagtaaatgaagcagtgaaacaaatttgtctc
ggggccgtaaaaaaaggatatacagcaaaagatgtacaagttcttgcccccatgtacaaa
ggtaatgcaggagtcaaccggctgaatgaggagcttcaggagctgtttaaccccaaagtg
ggacagaagcgtgaagtgacttttggtgaaaccgcatttcgcacaggggataaggtgctt
cagctggtaaacaacgccgaggagcaagtgttcaacggcgatatgggtgaaatcgttgcg
attttttacccaaatgaaaacgcagagaacgaagagatgatcgtggtttcttttgatggt
cgagaagtgacgtacaagcgatctgcctaccatcagctaacacttgcctattgctgctct
gtccacaagtcacaaggcagtgagtttccgatcgttgtgatgccttttgtgaaaaactac
catcgcatgcttcgacgcaagctggtgtatacgggaatcactcgcagcaaatcatttctg
atcatgtgtggagaaccggaagcttttcgcatcgccgtccaaagtaatgaggagggtgtg
cgttacagctacctggaggaacgtctgaaacaaggctga
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