Brevibacillus ruminantium: NDK47_20040
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Entry
NDK47_20040 CDS
T09631
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
brum
Brevibacillus ruminantium
Pathway
brum03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
brum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NDK47_20040 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brum03400
]
NDK47_20040 (mutM)
Enzymes [BR:
brum01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NDK47_20040 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NDK47_20040 (mutM)
DNA repair and recombination proteins [BR:
brum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NDK47_20040 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_SprT
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
USG64420
LinkDB
All DBs
Position
complement(4054223..4055083)
Genome browser
AA seq
286 aa
AA seq
DB search
MPELPEVETVVRTLQRLVLGKTIKNVSVLLPRIIRRPDDIEEFKAMLVGQTIHDIKRRAK
FIQFVLDRDVLISHLRMEGRYGLYRVDEPVEKHTHVIFHFTDGTELRYRDVRQFGTMDLI
PLGLETSEGPLAKLGVEPLDEGFTAEVLHSLLKGRPTKIKPLLLNQECIVGLGNIYVDES
LFRARIHPERPAGTLTARQTAKLHEAIVATLSEAVEQGGSSIKSYVNGQGEMGMFQQSLL
VYGRKGEPCTVCGTEIIRFVVGGRGTHICPACQKLAGKRPKRGEQK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccagaggttgagaccgttgtacgtacgctgcagcgtctcgtgctgggg
aaaacaatcaaaaacgtcagtgtgttgttgccgcgaattattcgcagaccggatgatatc
gaggaattcaaggccatgctggttggacagaccattcacgatatcaaacggcgcgccaaa
tttatccagtttgtgctggaccgtgacgtgcttatctcccatcttcggatggaagggcgc
tatggtctttaccgcgtggatgagccggtagaaaagcatacccatgtcatttttcacttt
accgatgggacagagctgcgttaccgtgacgtcagacagttcgggacgatggatctgatt
cccctgggattggagacgagtgaaggtccgctggccaagcttggggtcgagcccctggat
gaaggctttacggcagaagtgctgcacagcctcctgaaaggccgcccgacaaaaatcaag
ccgctgctcttaaatcaggaatgtatcgtcggattggggaatatttatgtggacgagtcc
ctttttcgagcacgcatccatcctgaacgtccggccggaacactgaccgcccggcaaaca
gccaagctgcatgaagcaatcgtagcaacactttcagaagcagtcgagcaaggcggcagc
tcgatcaaatcctacgtaaacggccagggtgagatggggatgttccagcagtcccttttg
gtatacggccgaaaaggcgagccctgtacagtctgcggaacagagattatccgctttgtc
gtcgggggaagaggcacacatatttgccccgcttgccaaaaactggcgggcaagcgtccc
aagcggggagagcagaaataa
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