Brevibacillus ruminantium: NDK47_20045
Help
Entry
NDK47_20045 CDS
T09631
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
brum
Brevibacillus ruminantium
Pathway
brum03030
DNA replication
brum03410
Base excision repair
brum03420
Nucleotide excision repair
brum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NDK47_20045 (polA)
03410 Base excision repair
NDK47_20045 (polA)
03420 Nucleotide excision repair
NDK47_20045 (polA)
03440 Homologous recombination
NDK47_20045 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brum03032
]
NDK47_20045 (polA)
03400 DNA repair and recombination proteins [BR:
brum03400
]
NDK47_20045 (polA)
Enzymes [BR:
brum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NDK47_20045 (polA)
DNA replication proteins [BR:
brum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NDK47_20045 (polA)
DNA repair and recombination proteins [BR:
brum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NDK47_20045 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NDK47_20045 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
DNA_pol_A_exo1
DUF61
DUF5878
Motif
Other DBs
NCBI-ProteinID:
USG64421
UniProt:
A0ABY4WIF8
LinkDB
All DBs
Position
complement(4055192..4057837)
Genome browser
AA seq
881 aa
AA seq
DB search
MSHLVLIDGNSIANRAFYALPLLSTSAGLHTNAVLGFTTMLLKVLEEMNPTHVLVAFDAG
KVVFRHSEFAEYKGGRSKTPSELSEQFPLIRDLLDAFSIRRFELEGYEADDIIGTLTLHA
DQNNWKTTVITGDKDMLQLVSDHVSVALTRKGVSEIELYTPKEIEEKYGLKPLQIIDLKG
LMGDTSDNIPGVPGVGEKTALKLLHEYGSVESVLENIDKVSGKKLQENLRENVDKAKLSK
ALATIMRDAPVEVTVEETAYEGYTPEPVTDFFKKMEFKSLLSKVKGAGTDDEKKGKGAPF
DFAVVESEHTARFADKLTSPMAVSVEMDGENYHHAPILGFGLAADGVSLYVPWDVAKEWT
AFQQWLADDQQEKWVFDGKRDTVSLAWHELTMAGIRFDSYLATYLLNAAESSPQVADIAS
HYADVQVLPDEEVYGKGAKRLVPEMGVLSEHVARKATALWQSVPRIRDAMAESKLEELLS
DLEEPLSLVLATMEKQGVKVNEHRLQQMGEELDTQLEKLTETIYELAGTSFNINSPKQLG
EILFDKLDLPVLKKTKTGPSTSADVLEKLAPYHPIIEAILHFRQLGKLRSTYIEGLTKEI
HPGTGKVHTIFNQATTATGRLSSTDPNLQNIPIRLEEGRKIREAFIPSEEGWYILAADYS
QIELRVLAHISGDANLIDAFQKGMDIHTRTAMDVFDVAETEVTSLMRRQAKAVNFGIVYG
ISDYGLSQNLNITRKEAGEFIERYFAVFSGVKQYMEDIVKQAKQDGFVTTLLNRRRYLPD
IKSSNFNLRSFAERTAMNTPIQGTAADIIKLAMIRMQGSLREQGLESRMLLQVHDELIFE
VPEKELEIMQQLVPDVMENALKLNVPLKVDVNYGRSWYEAK
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgagccatttggtgttaatagacgggaacagtatcgcgaaccgggctttttacgctttg
ccgcttttgtccacatcagcgggattgcacaccaatgcagtattgggatttaccacgatg
ctgctcaaggtgctggaggagatgaatccgacgcatgtgctggttgcgtttgacgcgggg
aaagtggtgtttcgccacagtgagtttgccgagtataaaggaggccgaagcaaaacgcct
tccgagctctctgagcagtttcccctgattcgcgatttgctggacgccttttcgatccgc
cgttttgagctggagggatatgaagcggatgatatcatcggaacgctgacactccatgcg
gatcagaacaactggaaaacgacagtgattacgggcgacaaggacatgcttcagcttgtt
tctgatcatgtctccgtcgccttgacccgaaaaggcgtcagcgagatcgagctctataca
cccaaggaaattgaagagaaatacgggttaaagccgcttcagatcatcgacctgaagggg
ctgatgggcgatacctctgacaatattccgggggtgccgggtgttggggaaaaaacagcg
ttgaagctgctgcacgagtacggatcggtggaaagcgtactggagaacatcgataaggta
tccggtaaaaagctgcaggaaaacctgcgggaaaacgtagacaaggccaagctgagcaaa
gcgttggcgacgatcatgcgcgatgcccccgtcgaagtcacggtggaagagacggcgtat
gaggggtacacgccggagccagtcacggatttcttcaagaaaatggaatttaaatccttg
ctttccaaagtaaaaggagcagggaccgatgacgagaaaaaaggcaaaggggcgcccttt
gactttgcagtggttgagagcgaacatactgcgcgctttgcggacaagctgacctctccc
atggcagtgtcggtggaaatggacggagagaattaccaccacgcgccgatcctgggcttt
ggtctggctgctgacggtgtttcgctttatgtgccctgggatgtggcaaaagaatggacg
gcctttcaacaatggctggcagatgaccaacaggaaaaatgggtgtttgacggaaagcgg
gacacggtaagcctggcctggcatgaactgaccatggccggtatccgattcgacagctat
ctggcgacctatttgctcaacgccgctgagagcagcccgcaggtggccgatatcgccagt
cattatgccgacgtgcaggtgctgccggatgaagaggtatacggcaaaggagcaaaacgt
ctcgtgccggagatgggtgtactgagtgagcatgtagcacgcaaggcgacagccctttgg
cagagcgtgccgcgcatcagggatgcgatggctgaaagcaagctggaggagctgctcagc
gatcttgaagagccgctcagtctggtgctggcaacaatggaaaagcagggtgtcaaagta
aatgagcatcgcttgcagcaaatgggagaggaattggacacacagctggagaagttgacg
gagaccatctacgagctggcaggaacgtcctttaatatcaactcgcccaaacagttgggg
gaaatcctgtttgacaagctggatttgccggtcttgaaaaagaccaaaaccggaccctcc
accagtgcggatgtgctggaaaagctggctccgtaccacccgattatcgaggcgattttg
catttccgtcaactgggcaagctgcgttccacctatatcgaaggcctgaccaaagagatt
catcccggtaccggaaaggtgcatacgatcttcaatcaggcgacaaccgcgaccggtcgt
ttgtcgagtacagatcccaacctgcagaacatcccgatacggctggaggaaggcagaaaa
atacgtgaggcgtttatcccctctgaagagggctggtacattctcgcggcggactattcg
caaatcgaactgcgggtcctggctcacatctccggggatgccaatttgatcgatgccttc
caaaagggaatggatattcacacccgcacagcgatggatgtgtttgacgtagccgagaca
gaggtgacctcactgatgcgtcggcaagccaaggcggtcaattttgggatcgtatacggg
atcagcgactatggcctttcgcaaaatctgaacattacgcggaaagaagcaggcgaattt
atcgagcgttacttcgctgttttttccggtgtgaagcaatatatggaagatatcgtgaag
caggcaaagcaggatggctttgtcacgaccctgttgaatcgcagacgctacctgccggat
atcaagagcagcaatttcaatctgcgctcatttgctgagcggacggcgatgaataccccg
attcaggggacggcagccgacattatcaagctggcgatgattcgcatgcaggggagcctg
cgagagcagggactggagagccggatgctgcttcaggtacacgatgaactgatttttgaa
gtgccggagaaggaactggaaatcatgcagcagctcgtccctgatgtgatggagaatgcg
ctgaaactgaacgttccgctgaaagtggatgtgaattacggacgaagctggtatgaagct
aagtaa
DBGET
integrated database retrieval system
