Brevibacillus ruminantium: NDK47_20195
Help
Entry
NDK47_20195 CDS
T09631
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
brum
Brevibacillus ruminantium
Pathway
brum03030
DNA replication
brum03430
Mismatch repair
brum03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NDK47_20195
03430 Mismatch repair
NDK47_20195
03440 Homologous recombination
NDK47_20195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brum03032
]
NDK47_20195
03400 DNA repair and recombination proteins [BR:
brum03400
]
NDK47_20195
Enzymes [BR:
brum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NDK47_20195
DNA replication proteins [BR:
brum03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NDK47_20195
DNA repair and recombination proteins [BR:
brum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NDK47_20195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF6282
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
USG64448
UniProt:
A0ABY4WE91
LinkDB
All DBs
Position
complement(4091458..4094886)
Genome browser
AA seq
1142 aa
AA seq
DB search
MTPFVHLHVHTEYSLLDGAARVEELVKRAAELGMKALAITDHANLYAAVPFYKACQQAGI
KPIIGMEVYVIEGNLQDRVRNAPPPSHLVLLAENSIGYANLLKLATIAGTDGHFILPRLN
KEILAKHADGLIALSGCLEGEVARLLLAGDAVGAKQAALWYRDIYGPDHFYLELQDHGVE
RERRLNQRLLRLGQETGLPLVVTNNVHYVDRNEHREHDILLAIGEGKTVDEENRFRYETD
QYYLKSGEEMTQLFAYAPEALANTVGIAERCNWELSFGRHILPKYPLADGLEPTNYLREL
CEQGCLERYGTITPEIRERLDHELSIITRTGFTDYFLIVWDFMRFAHEQEIPTGPGRGSS
AGSLVAYALKITNVDPIKYNLLFERFLNPERVTMPDIDIDFSVERRDEVIRYVADKYGRD
RVAQIITFGTMAARAAVRDTGRALGLSLGLIDRVAKMIPQSPGMTIAKAFELNPDLDKLC
AENAQARQLIETAKGVEGLPRHASTHAAGVVIAPEPLTHYVPLQTGSEGLALTQFPMEDL
EEIGLLKMDFLGLRNLTIIQEALRHLHQSGVEVDLENIPTDDAKTFQMLTRGETTGVFQL
ESAGFRHVLRDLKPTVLDDIIAVLALYRPGPMEIIPQYIRAKHKESPVEYAHPDLEPILS
ETHGFMIYQEHILLIASKLAGFSMGEADILRRAVGKKKRELLAEQREKFVAGCVRQGYGE
KLGHEIYDLIVRFADYGFPKAHSVAYGMISYQMAYLKANHPLAFMAALLSLSIGSQTRIA
EYTEEARRLHLQILPPDVNESEAVFTVSRDAIRFGLAAVKNVGYGAIESIVRERKSRPYR
DLFDFCARVDGRLVNRRVVESLILCGALDGLPGHRSQQMVLLDEAMGKATGKRSERDADQ
LNLFAADTAVDPVRQPAEYPEVPPFSHVQQLKEERELLGVYLSGHPLDQYAHLFNRPEVH
SVASLPECAREQNVKVVGMITHQKRIQTKKGEPMVFLQLEDKTAQVETVVFPKVFAKYAE
LLNTEQVVVAEARVDRQDDAVKLIANRFWDASLLPKPEMEPVLFVKISPQQEQDSTLHSL
QRLFVEKRGTIPVVLYYEGKRQTIRLPDSIRVEVNESFLELAREIVGRDSVIQKELPING
GG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaccccctttgtgcatttgcatgtgcatacggaatacagtctgctggacggggcggca
cgagtggaggagctggtaaagcgcgctgcggagctggggatgaaagccctggctatcaca
gatcacgccaatctttacgcggcagtccctttttacaaggcatgtcagcaggcgggaatc
aagccgatcatcgggatggaggtttacgtaatcgaaggaaaccttcaggatcgggtgaga
aatgcgccacccccctcccatctggtcttgctggcggaaaacagcatcggttacgcaaat
ctgctgaagctggctacgattgcaggtaccgatggccattttatcctgccccgattaaat
aaagaaatactggccaaacacgcggacggcctgatcgcgctcagcggctgtctggaaggc
gaggtggctcgccttcttctggcgggtgatgccgtgggtgcaaagcaggcagcgctgtgg
taccgcgatatttacggacctgatcatttttatctggagctgcaggatcacggtgtagag
cgtgagcggcggctcaaccagcggctgcttcgactgggccaagaaacaggtctgccgctt
gtagtgaccaacaatgtacattatgtagaccgcaatgagcatcgtgaacatgacatcctg
cttgcgattggcgaggggaaaacggtggatgaagaaaaccgcttccgctacgaaaccgac
cagtattacttgaaaagcggggaggagatgactcagctgtttgcgtacgctcccgaggct
ctggccaatactgtggggattgcagagcggtgcaactgggaattgtcgtttggacgtcat
attttgccgaaatatccgctggctgacggactggaaccgacgaattacttgcgcgagctg
tgcgagcagggctgtcttgaacggtatggaacgattacgcctgagatcagggagcggctg
gatcacgagctttccatcatcacccggaccggtttcaccgattactttctcattgtgtgg
gacttcatgcgctttgctcatgaacaggagataccgaccggaccgggacgtgggtcgtca
gcaggcagtctggtcgcctacgcactcaaaatcaccaatgtcgatccgataaagtacaac
cttctctttgaaaggttcctcaatcccgagcgggtgacgatgcccgatatcgatattgac
ttctcggtggaacggcgtgatgaagtgattcggtacgtcgcggataaatacggacgtgat
cgcgtggcccagattatcacctttggcacgatggctgcccgtgctgccgtgcgcgatacg
ggaagagcgctggggctgtcgctcggacttattgaccgtgtcgccaaaatgattccgcag
tcgccggggatgacgattgccaaagctttcgagctgaatcccgatttggacaaactgtgt
gcggaaaatgcgcaggctcgtcaattgatcgagacggccaaaggtgtggaggggctgccc
cgccatgcttccacccatgcggcaggagtcgtcatcgcacctgagccgttgacccattat
gtgccgttgcagacaggcagtgagggactggcattgactcagtttccgatggaggacctg
gaagagatcgggcttttgaagatggattttctcggtctcaggaacctgacgatcatccag
gaagcgttgcgccatttgcaccaatcgggtgtagaggtggatctggagaacatcccgacc
gatgacgccaagacgtttcaaatgctaacgcgcggagagacgacgggagtctttcaattg
gaatcagccggttttcgccatgtcctgagggatttgaagccgacagtcctggatgacatc
atcgccgtacttgccctgtaccgacccggaccgatggagatcattccacagtacatccgg
gccaagcacaaagagagtcctgtcgagtacgcccatcccgatctggagccgattctcagt
gaaacgcatggcttcatgatctatcaggagcatatcttgctgattgcctcaaagctggcc
ggcttcagcatgggagaggccgatattttgcggcgagcggttggaaagaaaaagcgcgaa
ctactcgcagagcagcgggaaaagttcgttgctggctgtgtacgacagggttacggagaa
aagctggggcatgaaatttatgatttgattgtccgttttgccgattacggatttcccaag
gcgcattccgtcgcatacgggatgatttcctaccagatggcttatctgaaagccaaccat
ccgctcgcttttatggctgccttgctttcactttccatcggcagtcagacgagaattgcc
gagtacacggaggaagcccgccgtctgcatctgcaaattttgccgcccgacgtcaatgaa
agcgaggccgttttcacagtcagccgggatgcgatccgctttggacttgccgcggtaaaa
aacgtcggctatggagccattgaatcgatcgtacgggagcggaaaagtagaccataccga
gatctattcgacttttgcgcgcgggtagacggcaggttggtcaacaggagggtcgtcgaa
tccctgattctctgcggtgcgctggacggactgccggggcatcgcagtcaacagatggtc
ctgctggatgaagcgatgggcaaagcgacaggcaaaagaagcgagcgcgatgcggatcag
cttaatcttttcgccgcagatacggcggttgatccggtgcgccagccagcggaataccca
gaggtgccgcccttttcccacgtccagcagctaaaggaagagcgcgagctgcttggagtt
tacctgtccggccatccgctcgaccagtatgctcatctgttcaaccgtccggaggtgcat
tccgttgccagcttgccggagtgtgcccgcgaacagaacgtaaaggtagtgggcatgatc
acccaccagaagcgcatccagacgaagaaaggggagccaatggtgtttcttcagctggag
gataagacggcacaggtagagacggttgtgtttcccaaagtgtttgccaagtatgccgaa
ctgttgaatacagagcaggtggtcgtggctgaagcgcgggtcgaccgccaggatgatgcg
gtaaagctgatcgccaaccgcttttgggacgcctcgctgctacccaaaccggaaatggag
ccggtcctgtttgtcaaaatatcgccacagcaggagcaggattcgaccctgcacagtttg
cagagactgtttgtcgaaaaaaggggaacgattcctgttgtattgtattacgaaggaaaa
agacagacaattcgcctacccgattcgattcgggtagaggtaaatgagtcatttttggag
ctagcgcgagaaattgtgggacgtgacagcgtaattcaaaaagaattgcccataaacggg
ggaggatga
DBGET
integrated database retrieval system
