Brevibacillus ruminantium: NDK47_23470
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Entry
NDK47_23470 CDS
T09631
Name
(GenBank) S-layer homology domain-containing protein
Organism
brum
Brevibacillus ruminantium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLH
aBig_2
Cadherin-like
DUF6273
He_PIG
Glucodextran_B
IG_AIR9
CarboxypepD_reg
Invasin_D3
TcaA_3rd_4th
TIG
Motif
Other DBs
NCBI-ProteinID:
USG65048
LinkDB
All DBs
Position
complement(4776325..4781349)
Genome browser
AA seq
1674 aa
AA seq
DB search
MTRIAINRIRPILFLSLVFILFFTSLPIHVVQAGDPPTDPPTDSQVTAQRIGDLPIGTKI
RDSKDWEYFTGKEESWNPTVKDVYKTAPITWILVDKEKHARNTSLFVSEEIVAELDVSHR
FDTLLWTESSLRAWLRGTLYPELSPLFQRAIAVTTYKKDYFDDLENDTLFVLAAQDLVTI
NDSMVDPDQTVIPYFNHANNRMANGNKSGFYRTRTIHSQYEVYYMVSNSTGEVRTSSVYP
PHGVRPAVNLKSDTIVMGPFSDSENGSSYYMLANEKYRGTAEINPAGLQAGQAADVLFQV
RNVENSIDTTFNQLADVTISGYVSAPDGTAGSFAGEELSGTQKTIPVPFTNGVATVPLVL
NSTTKQTLHFQIKGLLEPNVEAIVVQPAPDAVPSAIVERQPVGPSQDGGGPLSTQPTLKI
QDKFGNPIPGVTVRAVKKAESGVWTLRGNVSITSDTAGIASFTDLTAISTNTDHNIEAAV
IEFLIGNTVVAESTSFQIGKAPLIQRFWPVPHNSVDDPGKFKKLDSHVYITNEPYADLLF
SIKGANQVEVLVDGTSKARAERKAWNFEITQGAETLRIDSSDPFIDTFLLRFREEPILKT
SKRIEIVATSNARSESSSVVLLQAPTVLSLDVPVKLEANKTITITGSTDIEAKLPINITS
TQGMIESVTTDDEGHFSFAFTAPSALGKVTVTAEAPGVEEQLIESRDITIYEPFAITSPD
TCNGTVEKPFSCQLAATGGIGDRTWTIQSGSLPAGVELDSQTGLISGIPEREGTYPLTIA
VMDSTQEKRTKAITIIIEPKDVLPAPTGLRATAGDGVVVLSWERVEGATYYDVYEGLSSG
NYMGTMRFHYYPDSYSATGLPNNITRFFAVKAGNWEMESDFSAEVSATPRKNTVPAASHV
RIDGTPQVNETLRGRYTYEDQEDDPEGESIYQWYVMDDDSGTNKQALAGEDEQSLVLTRD
LQGKLVTFEVTPVAASGTRVGAAVESGAVGPVRAKPRPPETPETPETPETPETPETPETP
ETPETPETPETPGENEDGDEAAVAADTEALTIKFSAGDSENHVTRRVTLSSSGRNGSEII
WSSDNPSIIDDSGEVTRPAPDQGDILVTLTATITKGSFTASKSFVLTVLAREKAPEGNAD
LSDLQISGATLNPRFDPEITSYRAHVSNRTTSVTVTASIFDRDSTVTVQGKTVPNGKESD
DIDLDVGSNKIAVEVKAPDGTQKTYTIQVTRASSSSSSSSGSSRSEKSSSDNENTVQKGL
EVMIDGKLQKAVATMSASTKGGQTVHTVTVHAKNLADQLEKADQQTTVGITVTSPTDKVD
VVLTGDAAKAMDKKKAILEIQTPNGHYKLPVIELRIDQLATQFGAKVNLSDLIIHIGIAK
GDQAQVKRMGDAATKGKYTVVVPPVDFSVTATHQGKMLPIPSFTTYVERKIPLPAGVLAN
NVSTAVALTEQGKTYPVPTSVRSEEGKTYAVIHSLTNGIYSLIGNPVSLTDVNGHWSQEV
VNDMASQMVVNGGDGSHFRPDEPITRAEFASIIVRGLGLPDHENPVVYEDVKTSDWYAGA
VAKAQEYEIVNGYADGSFRPMHSITREEAMVMITRAMKLAGLETINSGVEVNDQLSRFPD
GMEVHSWAKDAVAAAVEHGLITGTNAGLMPKNMMTKAETAAMVQRMLIKAKLIE
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaggatcgcaataaaccgaatacgccctattcttttcctttccctcgtttttatc
ctcttttttacatctcttcctattcatgttgtacaagccggcgatccacccaccgatcca
cccaccgattctcaggtgactgcccagcgcattggcgatttgccgattgggacaaaaatt
cgcgatagcaaggattgggagtatttcacgggcaaggaagaaagctggaatccaactgtg
aaagacgtgtacaagactgctcccatcacctggattctcgtggataaagaaaagcacgca
cgaaacaccagcttgttcgtttccgaggaaattgtggctgagttagacgtgagtcatcga
tttgatacattgctgtggacagaatcctctcttcgagcatggttacggggaacattgtat
ccagaactttctccattgttccagcgtgcaattgcagtgaccacctacaaaaaagactat
tttgacgacttggaaaacgatactttgttcgtacttgctgcccaagatttagtaactatt
aatgattcgatggtagatccagaccaaaccgttattccgtacttcaatcatgcgaataac
aggatggctaatggaaacaaatcgggattttacaggacaagaacaattcattctcagtat
gaagtctattacatggtgagtaattctacaggtgaagttcgtacttcatccgtatatccc
ccccacggtgtacgcccagccgttaatttaaaatcggataccatcgtgatggggcccttt
agcgactccgagaacggcagttcctactatatgttagccaatgagaaatatcgggggacg
gctgagatcaatccagcgggactgcaagcaggacaagcagcagatgtcctttttcaggtt
cgcaatgtggagaacagtatcgacaccaccttcaaccagctagcggatgtaacgatcagc
ggctatgtttccgcaccggatggaacagcaggatcatttgctggcgaggaacttagcggt
acacaaaagacgattccagtgccatttaccaacggtgtcgcgactgtgcctcttgttttg
aattcaacgacgaagcagacgcttcattttcagatcaagggactgctggaaccaaatgtg
gaagcgattgtggttcaacccgcaccagatgctgttccgtccgcgattgttgagcggcag
ccagtcggaccttcacaagacggaggaggcccgctaagcacgcagcctactctaaagatt
caggacaaattcggcaatcccattcccggggtgacggttcgtgctgtgaaaaaagctgaa
tccggcgtctggacattgagaggaaatgtttcgatcacaagcgatacagcagggatcgct
tcctttactgatcttaccgccatcagtaccaataccgatcataatatcgaagcggcagtc
atcgaatttttaatcgggaatacagttgtggccgaaagcacatcgtttcaaatagggaaa
gcccctctgattcagagattttggccagttccccataattctgtagatgatccagggaag
tttaaaaaattggattctcatgtctatatcacgaatgagccttatgcggatctgttattc
tcgataaaaggcgccaatcaggttgaagttttggtagacgggaccagtaaagcacgtgca
gagaggaaggcatggaattttgaaattacgcaaggggcagagactcttcgtatcgattca
tcagaccctttcattgacacttttctactgcgctttagagaagagcctattctaaagaca
agtaaacgaattgaaatagtagcaacgtcaaacgcgcgcagcgaatcgagctccgttgtt
ttgctgcaagctccaacggtactatctcttgacgttcctgttaaactggaagcaaataag
acgatcaccatcaccggaagtactgatattgaagcaaaattgccaatcaacatcacttct
acccaaggtatgatcgagtcggtaacaactgatgatgaaggccatttctctttcgcgttc
acagcgccctctgctttaggaaaagtaaccgtaacagcagaagcacccggggtggaagaa
caactaatagaaagccgggacatcaccatttatgaaccgtttgcgatcacatctcccgat
acttgtaacggaaccgtggagaagcctttttcctgccagcttgcagccacgggagggatc
ggtgatcgaacctggacgatccaatcgggcagcctgcctgctggggtagaattggatagc
caaaccggcctgatctcgggcatacccgaaagagaaggcacgtatccgctaaccattgcg
gttatggattcaactcaggaaaagcgaacaaaagcaatcaccatcatcatcgagccaaaa
gatgtgctccctgcccccaccggcttgagggcaacagccggagatggcgtagttgttttg
tcttgggagcgtgtggaaggagccacctattacgatgtttatgagggtctctcttcaggc
aattacatggggacgatgagatttcattactatcctgacagctattcagctacagggcta
cccaataacatcactcgcttctttgcagtaaaggcaggaaattgggaaatggaaagcgac
ttctcagcggaagtgagcgcaacgcctagaaaaaatacagtacctgctgcaagtcatgtc
cgcatagacgggactccgcaggtgaacgagacgcttagaggaagatatacgtacgaggat
caggaagacgatccggaaggcgagtcgatctaccaatggtacgtaatggacgatgattcg
ggcacgaataaacaagcactggcaggagaggacgaacaatcgctagtgctgacgcgagat
ttgcagggcaagcttgtaacgtttgaggtcacgcctgttgccgcatcgggtaccagagtg
ggagcggcagtggaaagcggagcggtcggtcccgttcgtgccaagccgcgtccgccggaa
acgccggaaacgccggaaacgccagaaacgccagaaacaccagaaacgccggaaacgcca
gaaacgccggaaacaccagaaacaccagaaacgccaggtgaaaatgaagatggcgatgaa
gcggcagtagcagcagacaccgaggcgctgacaatcaaattttctgccggagacagcgag
aatcatgtgacccggcgtgttacgctttcaagctcagggcggaatgggagcgaaatcatt
tggtcctccgacaatccctctatcatcgacgacagtggtgaggtaacacgtccggctcca
gaccaaggcgatatcctggttaccttgacagcgacgattacaaagggttctttcactgcg
agcaagtcatttgtattaaccgttctggcgcgagagaaagcgcctgagggcaatgcagat
ttaagcgatttgcagatatctggcgctaccttgaacccaaggtttgatccagagatcact
tcctatcgggcgcatgtttcaaaccggacaacttccgtcacagtaacggcatcgatattc
gaccgcgattcgaccgtcacagtacaagggaaaaccgtgccaaacggaaaagaaagtgat
gacatcgatctggacgttggcagcaacaaaattgcggtcgaagtcaaggccccagatggt
acgcagaagacatacacgatccaggtgacaagagcatcctcctcctcttcgtcatcgtca
ggctcttctcgctccgaaaagagttcctccgacaatgagaatacggtacaaaaagggctg
gaagtgatgatcgatggcaaactgcaaaaagcagtggcaacgatgtctgcttcaacgaag
ggcgggcaaacggtgcataccgtgactgtgcatgcgaaaaatttggcggatcagcttgaa
aaggcagatcagcagacgacggttgggatcacagtcacgtctcccacagataaagtggat
gttgtcctgacaggtgatgcggccaaggctatggataaaaagaaggcgattttagaaata
cagacaccgaacggtcactacaagctgcctgttatcgaattgcgaatcgatcagttggcg
acgcagttcggagcaaaggtaaacctatcggatctcatcatccacatcgggatcgcgaag
ggcgatcaggcacaggtaaaaaggatgggcgacgcagcaacaaaagggaagtacacggtc
gtcgttccccccgtcgatttttcggtgacggccactcatcagggcaaaatgctgcctatc
ccgagctttactacgtatgtggaacggaaaatcccgctccctgctggtgtattggcaaat
aacgtctcaaccgcggttgctttgaccgaacaggggaaaacgtaccctgttcctacctct
gtacgttcagaggaagggaaaacctatgccgtgatccacagcttaacgaacggcatctat
tccctgattgggaatccggtttcgcttacggatgtcaacggccactggtcgcaagaagtg
gtaaatgacatggcgtcccagatggtggtaaacgggggagatggaagccatttccgtccg
gacgaaccgatcactcgtgctgagtttgcatccattattgttcggggactcggtcttcca
gatcatgagaatccggtcgtatacgaggatgtgaaaacgagcgattggtatgctggagct
gtggcgaaagcacaggaatacgaaatcgtgaacgggtatgcggatggatcattccgcccc
atgcattcgattacacgggaagaagcgatggtgatgatcacgcgggcgatgaagcttgca
ggattggaaacgatcaacagcggcgtggaagtgaatgatcagctatccaggtttccagac
ggtatggaggttcattcgtgggccaaggatgccgtcgctgcggcagtcgaacatggactg
attacagggacgaatgcgggactgatgccgaagaacatgatgacaaaagcagaaacagcg
gcaatggtccagcgaatgctgatcaaggcgaaactgattgagtaa
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integrated database retrieval system
