Brachybacterium avium: CFK39_00075
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Entry
CFK39_00075 CDS
T04950
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
brv
Brachybacterium avium
Pathway
brv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
brv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFK39_00075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brv03400
]
CFK39_00075
DNA repair and recombination proteins [BR:
brv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFK39_00075
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFK39_00075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_25
AAA_21
DnaJ_CXXCXGXG
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
ASK64502
UniProt:
A0A220U971
LinkDB
All DBs
Position
13413..16280
Genome browser
AA seq
955 aa
AA seq
DB search
MTESLVVRGAREHNLKNIDIDIPRNKLVVFSGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPSVDLIEGLSPAVSIDQKSTNRNPRSTVGTITEIYDYLRLLFSRTGEQH
CPVCGERVSSSSAEQIVDTLLGQEPGTRFQLLAPVVQGRKGEHVDLLSALRSQGYARARI
DGKNRRLDEEITLDKKFKHTIEVVVDRLAAKPDSRRRLTDSVETALRLAEGIVVVDFVDL
EEDDPGRIRRFSEKRACPNDHPLAIDDIEPRTFSFNAPYGACPECTGLGQRLEVDPELVV
PDEDLTLAEGAIAPWAMGHSDRHLEVMAGLAEQLSFSMDVPWRALPQRATEALLHGKDHK
VHVKYRNRFGRERTYSTGFEGVMHFLERRHSDTESDWAKDRYEQFMREVPCPACRGARLR
PEVLAVTVGGRSIAEVTEMSIREAHAFHDGLELGEREAAIADEVLREIRSRLGFLLDVGL
DYLTLARAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNARLIGTLERLR
DLGNTLIVVEHDEDTLNSADWVVDIGPLAGEHGGRVVHSGGVEELKRNPDSLTGRYLSGE
LEIPLPAQRRPIDKARMLEVVAPRANNLVGQDVAFPLGVLTAVTGVSGSGKSSLVNDILY
SVLAKELNRARIVPGRHKRVTGLEHLDKVVHVDQSPIGRTPRSNPATYTGVWDRVRTLFA
QTNEAKIRGYTAGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVQCEVCHGQRYNRETL
EVKFKDKNVAEVLGMSIAEALEFFDAVPAIRRQMQTLVDVGLGYVKLGQSATTLSGGEAQ
RVKLSSELHKRSNGRTIYVLDEPTTGLHFEDVRKLLDVLGGLVDKGNSVIVIEHNLDVIK
TADHVIDLGPDGGSGGGRIVATGTPEQVAETPGSYTGHFLAPMLTTGRAGLSGKR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaatctctggtcgtccgtggtgcgcgcgagcacaacctcaagaacatcgacatc
gacatcccccgcaacaagctggtggtgttctcggggctgtccggctccgggaagagctcc
ctggcgttcgacaccatcttcgccgaggggcagcgtcgctatgtcgaatcgctgtcggcc
tacgcccggcagttcctgggccagatggacaagccctccgtcgacctcatcgagggtctc
tccccggcggtctcgatcgatcagaagtcgaccaaccggaacccgcggtccaccgtcggc
accatcaccgagatctacgactacctgcgcctgctgttctcccgcaccggcgagcagcac
tgcccggtctgcggcgagcgggtcagctcctcctcggcggagcagatcgtggacaccctg
ctcggccaggagcccggcacccgcttccagctgctcgcgcccgtggtccagggccgcaag
ggcgagcacgtggacctgctcagcgccctgcgctcgcagggctatgcccgcgcccggatc
gacgggaagaaccgtcggctcgatgaggagatcacgctcgacaagaagttcaagcacacc
atcgaggtggtcgtggaccgcctcgccgcgaagcccgactcgcgccgccgcctcaccgac
tcggtggagaccgctctgcggctcgccgagggcatcgtggtggtcgacttcgtagacctg
gaggaggacgatccgggccgcatccgccgcttctccgagaagcgcgcctgccccaacgat
catccgctggcgatcgatgacatcgaaccgcgcaccttctccttcaacgcgccctacggc
gcctgccccgagtgcaccggcctcggccagcgtctcgaggtcgacccggagctggtggtc
cccgatgaggacctcaccctcgccgagggcgcgatcgccccctgggcgatggggcattcc
gatcgccacctcgaggtgatggcgggactggccgagcagctcagcttctccatggacgtg
ccgtggagggcgctgccgcagcgcgccacggaggcgctgctgcacggcaaggaccacaag
gtccacgtgaagtaccgcaaccgcttcggccgtgagcgcacctactccaccggcttcgag
ggcgtcatgcacttcctcgagcgccgccactccgacaccgaatcggactgggccaaggat
cgctacgagcagttcatgcgcgaggtcccgtgccccgcctgccggggcgcccggctgcgc
cccgaggtgctggcggtgaccgtgggcggccgctccatcgccgaggtcaccgagatgtcg
atccgcgaggcccatgccttccacgacggcctcgagctgggcgagcgcgaagccgcgatc
gccgacgaggtgctgcgggagatccgctcccggctgggattcctgctcgatgtgggcctg
gactacctcaccctcgcccgcgccgccgggaccctctccggcggcgaggcccagcggatc
cgactcgccacccagatcggctccggcctggtcggcgtgctgtacgtgctggacgaaccc
tcgatcggtctgcaccagcgggacaacgcgcgcctcatcggcaccctcgagcggctgcgc
gacctcggcaacaccctgatcgtcgtcgagcacgacgaggacaccctgaactccgccgac
tgggtggtggacatcggcccgctggccggtgagcacggcggccgggtggtgcactccggc
ggggtcgaggagctcaagcgcaaccccgacagcctcaccggccgctatctctccggcgag
ctggagatcccgctgcccgcacagcggcgtccgatcgacaaggcgcggatgctcgaggtc
gtcgccccccgtgcgaacaacctcgtcgggcaggacgtcgcgttcccgctcggcgtgctg
accgccgtcaccggggtctccggttcagggaagtcctcgctcgtcaacgacatcctgtac
tcggtgctcgccaaggagctcaatcgagcccgcatcgtgcccgggcgccacaagcgggtc
accgggctcgagcacctcgacaaggtggtgcacgtggaccagtcgcccatcggccgcacc
ccgcgctcgaaccccgccacctacaccggcgtgtgggaccgggtgcgcaccctgttcgcc
cagaccaacgaggcgaagatccgcggctacaccgccggccgcttctccttcaacgtcaag
ggcggccgctgcgaggcctgctccggcgacggtacgctgaagatcgagatgaacttcctg
ccggatgtctacgtccagtgcgaggtctgccacggccagcggtacaaccgcgagaccctc
gaggtgaagttcaaggacaagaacgtcgcggaggtgctcggcatgtcgatcgccgaggcc
ctcgagttcttcgacgcggtccccgcgatccgccgccagatgcagaccctggtcgatgtg
gggctcggctacgtgaagctcgggcagtccgcgaccaccctctccggtggcgaggcgcag
cgcgtcaagctctcctccgaactgcacaagcgctccaacggccgcaccatctacgtgctg
gacgagcccaccacgggtctgcacttcgaggacgtccgcaagctcctcgacgtgctgggc
ggcctggtggacaaggggaactcggtgatcgtcatcgagcacaacctcgatgtcatcaag
acggccgaccacgtcatcgacctcggccccgacgggggctccggcggcggacggatcgtc
gccaccggcacccccgaacaggtggccgagacccccggctcctacaccggccacttcctc
gccccgatgctgaccaccggacgagcgggcctgtccgggaagaggtga
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