Brachybacterium avium: CFK39_03060
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Entry
CFK39_03060 CDS
T04950
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
brv
Brachybacterium avium
Pathway
brv00260
Glycine, serine and threonine metabolism
brv00460
Cyanoamino acid metabolism
brv00630
Glyoxylate and dicarboxylate metabolism
brv00670
One carbon pool by folate
brv00680
Methane metabolism
brv01100
Metabolic pathways
brv01110
Biosynthesis of secondary metabolites
brv01120
Microbial metabolism in diverse environments
brv01200
Carbon metabolism
brv01230
Biosynthesis of amino acids
brv01240
Biosynthesis of cofactors
brv04981
Folate transport and metabolism
Module
brv_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
brv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CFK39_03060
09102 Energy metabolism
00680 Methane metabolism
CFK39_03060
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CFK39_03060
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CFK39_03060
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CFK39_03060
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CFK39_03060
Enzymes [BR:
brv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CFK39_03060
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
SelA
Motif
Other DBs
NCBI-ProteinID:
ASK64978
UniProt:
A0A220UA06
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Position
complement(672409..673677)
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AA seq
422 aa
AA seq
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MNVLDQSIADLDPDIAQVLDKELARQQRTLEMIASENFVPRAVLQAQGSVLTNKYAEGYP
GRRYYGGCEEVDVAEQIAIDRAKELFGAEHANLQPHSGATANAAVMHALARPGDKLMGLS
LAHGGHLTHGMKINFSGRLYDIVAYETEPETGQIDMAKVRELAVAEQPKVIVAGWSAYTR
QLDFAAFREIADEVGAALWVDMAHFAGLVAAGLHPSPVPYADVVSTTIHKTIGGPRSGMI
LCKEKWAKKIDSAVFPGQQGGPLMHVIAAKAVALKVAATDEFKDRQARTLEGAKIIAERL
QAKDARAAGVKVISGGTDVHLVLVDLVDSELDGQQAEDRLHEAGITVNRNAVPNDPRPPR
VTSGLRIGTPALATRGFGAKEFTEVADVIALALTGGADLEALRARTAALAESKPLYPELQ
QY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgtcctcgaccagtccatcgccgatctcgacccggacatcgcccaggtcctcgac
aaggagctggcccgccagcagcgcaccctggagatgatcgcgagcgagaacttcgtgccg
cgtgcggtgctccaggcccagggctcggtgctcaccaacaaatacgccgaggggtacccg
ggtcgccgctactacggcggctgcgaagaggtcgacgtcgctgagcagatcgcgatcgac
cgcgccaaggagctgttcggcgccgagcacgcgaacctccagccccactccggcgccacc
gccaacgcggcggtcatgcacgccctggcccgtcccggtgacaagctgatgggcctctct
ctcgcccatggcggccacctcacccacggcatgaagatcaacttctccggccgcctctac
gacatcgtcgcctacgagaccgagccggagaccggccagatcgatatggccaaggtgcgg
gagctggctgtcgccgagcagccgaaggtgatcgtcgcgggctggtccgcctacacccgc
cagctggatttcgccgccttccgcgagatcgccgacgaggtcggggcggcgctctgggtc
gacatggcccacttcgcaggactggtcgccgcgggcctgcaccccagccccgtgccgtac
gcggacgtcgtctccaccaccatccacaagaccatcggcgggccccgctccggcatgatc
ctgtgcaaggagaagtgggccaagaagatcgactcggccgtgttccccggccagcagggc
ggcccgctgatgcacgtcatcgccgccaaggccgtcgcgctcaaggtcgccgccacggac
gagttcaaggaccgtcaggcccgcaccctggaaggcgcgaagatcatcgccgagcggctc
caggcgaaggatgcccgggccgccggggtgaaggtgatctccgggggcaccgacgtgcac
ctggtgctggtggacctggtcgacagcgagctggacggccagcaggccgaggaccgtctc
cacgaggcagggatcaccgtcaatcgcaacgccgtcccgaacgacccgcggccgccgcgc
gtcacctcgggcctgcgcatcggcacgcccgccctggccacccgcggcttcggtgccaag
gaattcaccgaggtcgccgacgtcatcgcgctggcgctgaccggtggcgcagacctcgag
gcgctgcgcgcccgcaccgcggcgctggccgagtcgaagccgctgtaccccgagctgcag
cagtactga
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