Brachybacterium avium: CFK39_04155
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Entry
CFK39_04155 CDS
T04950
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
brv
Brachybacterium avium
Pathway
brv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
brv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFK39_04155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
brv03021
]
CFK39_04155
03400 DNA repair and recombination proteins [BR:
brv03400
]
CFK39_04155
Enzymes [BR:
brv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFK39_04155
Transcription machinery [BR:
brv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFK39_04155
DNA repair and recombination proteins [BR:
brv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFK39_04155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ASK65151
UniProt:
A0A220UB54
LinkDB
All DBs
Position
complement(915789..916784)
Genome browser
AA seq
331 aa
AA seq
DB search
MLIAQRPTLTEEVVSENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDITEVILNIKNLVVSSENDEPVVMYLRREEAGHVTAADITPPAGVEIHN
PDLHIATLNEKGRLEIELIVERGRGYVSASQNKGVDGEIGRVPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKPAISARDAVASAGKTLVELFGLAHELNQEAEGIEIGPSPTD
QALAADLALPINDLNLTVRSYNCLMREGVHTVGELTARSEADLLDIRNFGQKSIDEVKAK
LADLGLSLKDSPAGFDPSALDSYSDDFGDQY
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgctcattgcacagcgccccacgctgaccgaagaggtcgtgtcggagaaccgctcccgg
ttcgtcatcgagccgctcgagccgggcttcggctacaccctcggcaactcactgcgtcgc
acgctgctgtcctccatccccggcgccgcggtcacctcgatccgcatcgacggtgtgctg
cacgagttcagcaccgtccccggcgtcaaggaggacatcaccgaggtcatcctcaacatc
aagaacctcgtcgtctcctcggagaacgatgagcccgtcgtgatgtacctgcggcgcgaa
gaggccggccacgtcaccgccgccgacatcaccccgccggccggtgtggagatccacaac
cccgacctgcacatcgcgaccctcaacgagaagggccgcctggagatcgagctgatcgtc
gagcgcggtcgcggctacgtctccgcctcgcagaacaagggcgtggacggcgagatcggc
cgcgtcccggtcgactcgatctactcgcccgtgctcaaggtgacctacaaggtcgaggcg
acccgagtcgagcagcgtaccgacttcgacaagctgatcgtcgacgtcgagaccaagccg
gccatctccgcgcgtgacgcggtggcctcggccggcaagaccctggtcgagctgttcggt
ctggcccacgagctgaaccaggaggcggagggcatcgagatcggcccctcgcccaccgat
caggctctggccgccgatctggcgctgccgatcaacgacctgaacctcacggtgcggtcg
tacaactgcctgatgcgcgagggtgttcacaccgtcggtgagctgaccgcccgttccgag
gccgatctgctcgacatccgcaacttcggccagaagtccatcgatgaggtcaaggccaag
ctcgccgacctcggactgtcgctgaaggactccccggccggcttcgacccgtcggccctg
gactcctactccgacgacttcggcgaccagtactga
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