Brachybacterium avium: CFK39_06130
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Entry
CFK39_06130 CDS
T04950
Name
(GenBank) DNA repair protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
brv
Brachybacterium avium
Brite
KEGG Orthology (KO) [BR:
brv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brv03400
]
CFK39_06130
DNA repair and recombination proteins [BR:
brv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFK39_06130
Archaeal homologous recombinant proteins
CFK39_06130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
DUF5906
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASK65478
UniProt:
A0A220UB91
LinkDB
All DBs
Position
complement(1339704..1342772)
Genome browser
AA seq
1022 aa
AA seq
DB search
MKLHHLRLTGIGPFAGTVQIDLAALGASGMFLLEGPTGSGKSTILDAIVYALYGQVAGSV
SSGDRIRSQFAPPTEASVVDLVFETASGIFRVRRQPEFHRPKLRGTGTTKEQAKAVLWRI
GSPQLIEDVIADTAGGGSGVEAIAARIDEVGREIQRAVGLTREQFTQTVLLPQNEFARFL
RAGTGERQTVLQRVFGTETYAAVEKQLEEMRKQARREVDAAQQTLGTALARFTEAAALEE
EPVGVLEEHAAALRLEPLAGLAEEHLAAVTARADEAGGAAEQAGTAEQAARTAAEAATTA
RTRIDRRRELDELADRLEKEKTALESAQTALQRDETARPVVEVLRRRDGATTKAATVVEA
LAQLASTTAERQKSVVDLLEEEDAAAQLAATADEATTAAGTLKDLVELEAGLPAREQQLA
GRREQLTASTTALAALTEQLEARPTRRTEQVTARDAARKDAAALGDARLALRTAEERQQA
TTAAAAQQKQVETAREQAAASLRTAQERAATENQLRRRRFAGIAAELAVDLEAGDACPVC
GALEHPHPASTAEDAVGPEQVEAAEEERRAAEAAHSRAEQQHALAGQELARLHEAAGDLT
PETATTAVEAVKTQVTAARTAEKEAAELETALTAFDEETERLTRRREADALGVERERTAI
AAAAEALETDRSRIAEARGEDDSIADRRRAHLARARAATALREALRSRTEAEQRVAELVE
EAETSLAASGLATVEAVRAAVLAAEERGRLQKLVQTRAVDESRLADGLAEEGIAEVVATP
EAREQAEAVVVATAEKLKAARAAVQEAAGIAARLRGIAERAAAARTALRTASAQVRSVSE
DAGITVRVADLATGRSSDGERVQLSTYVLMWRLDAVIEAANVRLALFSGSDLELLRDTGA
RGARKTGLDLLVLDRRTDQVRVPETLSGGETFFVSLALALGLADIVMGEAGGVQMETLFI
DEGFGSLDPETLETVVREIGRLAESGRVIGIVSHVGDMKAQIAEQIHVRRGADARSTLTV
TA
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcttcaccacctgcgcctgaccgggatcggccccttcgccggcaccgtgcagatc
gacctcgccgctctcggcgcgagcggcatgttcctgctcgagggccccaccggctccggc
aagtccacgatcctcgatgccatcgtctacgccctgtacgggcaggtcgccggcagcgtc
agcagcggcgaccggatccgttcgcagttcgcgccgcccaccgaggcgagcgtggtggac
ctggtgttcgagaccgcctccggcatcttccgggtgcgccgccaacccgagttccaccgc
cccaaactgcgtggcaccggcaccacgaaggagcaggccaaggccgtgctctggcggatc
ggctccccgcagctgatcgaggacgtcatcgccgacaccgcaggcgggggcagcggcgtc
gaagcgatcgccgcccggatcgacgaagtgggccgcgagatccagcgcgccgtgggactg
acccgcgagcagttcacgcagaccgtcctgctgccgcagaacgagttcgcccgcttcctg
cgcgccggcaccggggaacgccagacggtgctgcagcgcgtgttcggcaccgagacctac
gccgccgtcgagaagcagctcgaggagatgcgcaagcaggccaggcgcgaggtcgacgcc
gcccagcagaccctcggcaccgcgctggcccgcttcaccgaagccgccgctctggaggag
gaaccggtcggcgtgctcgaggagcacgccgctgcactgcgcctggagccgctggccggg
ctcgccgaggagcacctcgcggcggtgaccgcccgggccgacgaggccggtggcgcggcg
gagcaggccgggaccgccgaacaggccgcccgcaccgcggccgaggccgcgaccaccgcc
cgcacgcgcatcgaccgccggcgggagctcgacgagctcgccgatcggctcgagaaggag
aagaccgccctcgagagcgcgcagaccgccctgcagcgcgacgagaccgctcgccccgtc
gtcgaggtgctgcgtcgccgcgacggcgccaccacgaaggccgccaccgtggtcgaggcc
ctcgcacagctcgcgagcaccaccgcggagcggcagaagtcggtggtggacctgctggag
gaggaggacgctgctgcccagctggccgcaacggccgacgaggccacgaccgccgccggc
acgctgaaggacctcgtcgagctcgaggccgggctgcccgcgcgggagcagcagctcgcc
gggcgacgcgagcagctcaccgcgtcgacgaccgccctcgccgcgctcaccgagcagctc
gaggcacggccgacccgacgcaccgagcaggtcaccgcccgggatgccgcgcgcaaggat
gccgccgctctcggtgacgcccggctcgcgctgcgcaccgccgaggagcgccaacaggcc
accaccgctgccgcggcccagcagaaacaggtcgagaccgcccgcgaacaggccgcagcc
agcctgcgcaccgcgcaggaacgggcggcgacggagaaccagctgcgccgccgccgcttc
gccgggatcgccgccgagctcgccgtcgacctcgaggccggggacgcctgccccgtctgc
ggcgcgctcgagcatccgcacccggcgagcaccgccgaggacgccgtcggccccgagcag
gtcgaggccgcggaggaggagcgccgggccgccgaggccgcgcactcccgcgctgagcag
cagcacgccctggcgggccaggagctcgcccggctccacgaggccgccggagacctcacc
cccgagaccgcgacgaccgccgtcgaggcggtgaagacgcaggtcactgccgcccgcacg
gccgagaaggaggccgcagagctcgagaccgcgctgaccgccttcgacgaggagaccgag
cgcctcacccggcgcagggaggccgatgctctcggcgtcgagcgcgaacgcaccgcgatc
gccgccgcggccgaggcactggagaccgaccgcagcaggatcgccgaggctcgcggggag
gacgactccatcgccgaccgccgccgcgcccacctcgcccgcgcccgggccgcgaccgcc
ctgcgggaggcgctgcgcagccggaccgaggccgagcagcgggtggcggagctcgtcgag
gaggcggagacgtccctggctgccagcgggctcgccaccgtcgaggcggtccgtgccgcc
gtcctcgccgccgaggagcgcgggcggctgcagaagctcgtccagacccgcgcggtcgac
gagtcccggctcgccgacggcctggccgaggagggcatcgccgaggtcgtcgcgacgccg
gaggcccgggagcaggcggaggccgtagtggtcgcgaccgccgagaagctcaaagccgcc
cgtgccgcggtgcaggaggccgccggtatcgccgcccggctgcggggcatcgctgaacgc
gccgccgccgcccggaccgcactgcggaccgcatcggcccaggtgcgcagcgtcagcgag
gacgcgggcatcaccgtgcgcgtcgccgacctcgccaccggccgctcgagcgacggggag
cgggtgcagctgtccacctacgtgctgatgtggcggctcgacgccgtcatcgaggcggcg
aacgtgcgcctggccctgttctccggctccgacctcgagctgctgcgcgacaccggtgcc
cgcggcgcgaggaagaccggcctggacctgctggtgctggaccgccgcaccgaccaggtg
cgcgtgcccgagaccctctccggcggcgagaccttcttcgtctccctcgcgctcgccctc
ggcctcgccgacatcgtcatgggcgaggccgggggagtgcagatggagaccctcttcatc
gacgagggcttcggctcgctggaccccgagacgctcgagaccgtggtccgcgagatcgga
cggctcgccgagagcggccgcgtgatcgggatcgtcagccacgtcggcgacatgaaagcg
cagatcgccgagcagatccacgtgcgccgcggcgccgacgcccgctccaccctgaccgtc
accgcgtga
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