Brachybacterium avium: CFK39_06135
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Entry
CFK39_06135 CDS
T04950
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
brv
Brachybacterium avium
Brite
KEGG Orthology (KO) [BR:
brv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
brv03400
]
CFK39_06135
DNA repair and recombination proteins [BR:
brv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFK39_06135
Archaeal homologous recombinant proteins
CFK39_06135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ASK65479
UniProt:
A0A220UBD2
LinkDB
All DBs
Position
complement(1342769..1343932)
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AA seq
387 aa
AA seq
DB search
MKILHTSDWHLGRTLHKVDLHAHQAAFLDWLVALVETERVDVVVIPGDVYDRAVPAVSSV
TLLDSALARLADTGATVVLTSGNHDSPERLGFGRSLMRAGIHLLTDVPGIEHPVSVADEH
GEVLFFGLPYLEPDRARTELVAEGEPPLARSHEAVTRAALERVHERAAAHPGARTVVLAH
TFVTGGDASDSERDLSVGGVDSVPAGVLGGLDYLALGHLHGCQDLTRLVGAPAWYSGSPL
AFSFSEKNHRKSVLLVELGAPGTAAEVRRIHTPVPRPLTELRGSLEEILARAPEHGGDWI
KAVVTDPARPAHLQEQLREAFPQLLLTEYAPEGREARAGTPVVRREQNPLDVMDDFLAHV
TGAAPTAAEHEVLDRAYTAVRRQQEAS
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgcacacctcggactggcacctgggccgcaccctgcacaaggtcgacctg
catgcccaccaggccgccttcctcgactggctggtcgcgctggtcgagaccgagcgggtc
gacgtggtcgtcatccccggcgacgtctacgaccgcgccgtgcccgccgtgtccagcgtg
accctgctggacagcgccctggcgcgcctggccgacaccggcgccaccgtggtgctgacc
tccgggaaccatgactccccggagcggctcggcttcggccgttccctgatgcgcgccggc
atccacctgctcaccgacgttcccggcatcgaacaccccgtctccgtggccgatgagcac
ggcgaggtgctcttcttcggcctgccctacctcgaacccgaccgggcccgcaccgagctg
gtcgcggagggggagccgccgctggctcgcagccacgaggccgtcacccgcgccgcgctg
gagcgtgtgcatgagcgcgccgccgcgcatccgggagcgcgcaccgtcgtcctcgcccac
accttcgtcaccggcggcgatgccagcgactccgagcgggacctctccgtcggcggcgtc
gactcggtgcccgccggtgtgctgggaggcctcgactacctggcgctgggccacctgcac
ggctgccaggacctcacccgcctcgtcggcgcccccgcctggtactccggctcgccgctg
gccttctccttctccgagaagaaccaccgcaagtcggtgctgctggtcgagctcggcgcc
cccgggaccgcggcagaggtccgacggatccacaccccggtgccgcgcccgctcaccgag
ctgcgcggctccctcgaggagatcctcgcccgcgcccccgagcacggcggcgactggatc
aaggccgtcgtcaccgacccggcccgccccgcccacctgcaggaacagctgcgcgaggcc
ttcccgcaactgctgctgaccgaatacgcgcccgaggggcgggaggcgagagcgggcacc
ccggtggtgcggcgggagcagaatccgttggacgtgatggacgacttcctcgcccacgtc
accggcgcggctcccaccgccgccgagcacgaggtcctggaccgcgcctataccgcggtg
cgccgccagcaggaggcctcgtga
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