Brachybacterium avium: CFK39_15055
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Entry
CFK39_15055 CDS
T04950
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
brv
Brachybacterium avium
Pathway
brv03030
DNA replication
brv03430
Mismatch repair
brv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
brv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFK39_15055
03430 Mismatch repair
CFK39_15055
03440 Homologous recombination
CFK39_15055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
brv03032
]
CFK39_15055
03400 DNA repair and recombination proteins [BR:
brv03400
]
CFK39_15055
Enzymes [BR:
brv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFK39_15055
DNA replication proteins [BR:
brv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CFK39_15055
DNA repair and recombination proteins [BR:
brv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CFK39_15055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DUF7508
RNase_H_2
DNA_pol_A_exo1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ASK66903
UniProt:
A0A220UGQ1
LinkDB
All DBs
Position
complement(3360967..3362625)
Genome browser
AA seq
552 aa
AA seq
DB search
MSARRQLSFDDLGTPLAEATLVVVDLETTGTDPAADAITEIGAVKVRGGEVLGEFRTFVD
PERPIPAYIAALTGITDASVAEAPSIRTVLPMFLDFAGDAALVAHNARFDIGFLSAQAAV
CGVSWPRPRVLDTLALARTVFRRDEVRDHKLSTLARHVGASITPDHRALSDARATVDVLH
AIIERLGAAGASTLEDLGTAHRRATPAQLRKKHLAADVPPVPGVYQFLDAQGGVLYVGTS
RNLRSRVRTYFTAAETRRKVLDILPRLESIRVIECATPTEAGIRELRIIGREKPPSNRHG
LNPQTAHWLRLGPAGQGLRAARLAKTETDGSAQLGPLASRHEAEPLRGLLTDAILGRGAA
FDGSSHREVSSGGHRARLRRAILEDPSEVLDHVAARLRSHVEAGRYEDAEKLRRLAHSYL
TAARRASRLRALAEVPLLIAARPSTEPVIGGRGWELIAVRHGRFSGTTLVPFGKDPLPFA
RSLEMTGVGEAELAAPLCQGYHQEAEILLSWLEGDGVRTVLVEGTWQIPARARFDQEHLA
RRFARTAAGVQA
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcgccgccagctgagcttcgatgatctcggcacccccctggcggaggcgacg
ctcgtggtcgtcgacctggagaccaccggcaccgatcctgcggccgacgcgatcaccgag
atcggggcggtgaaggtccgcggcggcgaggtgctcggggagttccgcaccttcgtggac
cccgagcggccaatccccgcctacatcgcggcgctcaccggcatcaccgacgcctcggtc
gccgaggcaccctccatccgcaccgtgctgccgatgttcctggacttcgccggagatgcg
gcgctggtagcgcacaacgcccgcttcgacatcggtttcctcagcgcccaggcggctgtg
tgcggggtcagctggccccggccccgtgtgctggataccctcgcgctggcccgcaccgtc
ttccgccgggacgaggtccgcgaccacaagctctccaccctcgcgcggcacgtcggagcg
agcatcacgccggatcaccgggccctctccgatgcccgggccaccgtggacgtgctgcat
gcgatcatcgagcggctcggggcggcaggtgcctccaccctcgaggacctgggcaccgcg
caccgcagggcgacgccggctcagctgcgcaagaagcatctcgccgccgacgtccccccg
gttccaggggtctatcagttcctcgatgcccagggcggggtgctctatgtcgggacctct
cgcaacctgcgctcccgggtgcgcacctacttcaccgccgcggagacccgacgcaaggtg
ctggacatcctcccgcgtctggagtcgatccgggtcatcgaatgtgccaccccgaccgag
gccgggatccgggagctgcggatcatcggccgcgagaagccgccctcgaaccggcatggc
ctgaacccccagacggcgcactggctgcgcctgggccccgccggccagggcctgcgcgcc
gcccgcctggcgaagaccgagacggatggttcggcacagctcgggccgctggcctcccgg
cacgaggccgagccgctgcgcgggctgctgactgacgcgatcctcgggcggggcgcggcc
ttcgacggctcctctcaccgggaggtcagctcgggcggacaccgcgcacggctgcgacgg
gcgatcctcgaggacccctccgaggtgctcgaccacgtcgccgcccggctgcgctcccac
gtggaggcggggcgctacgaggacgccgagaagctgcgcaggctcgcccacagctatctc
accgcggcgcggcgcgcctcccggctccgcgccctggcggaggtgccgctgctcatcgcg
gcgcgacccagcaccgagccggtgatcggcggccgcggctgggagctgatcgcggtgcgc
cacggccgcttctccggcaccaccctggtgccgttcggcaaggatccgctgcccttcgcc
cggtccctggagatgacgggggtcggcgaggccgagctggccgcacccctgtgccagggc
taccaccaggaggcggagatcctgctgtcctggctcgagggcgacggggtgcgcacggtg
ctggtcgaaggcacctggcagatcccggcgcgggccagattcgatcaggagcatctcgcc
cggcgcttcgcacggaccgcagcgggcgttcaggcatag
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